Supervised estimation of Granger-based causality between time series

Brain effective connectivity aims to detect causal interactions between distinct brain units and it is typically studied through the analysis of direct measurements of the neural activity, e.g., magneto/electroencephalography (M/EEG) signals. The literature on methods for causal inference is vast. It includes model-based methods in which a generative model of the data is assumed and model-free methods that directly infer causality from the probability distribution of the underlying stochastic process. Here, we firstly focus on the model-based methods developed from the Granger criterion of causality, which assumes the autoregressive model of the data. Secondly, we introduce a new perspective, that looks at the problem in a way that is typical of the machine learning literature. Then, we formulate the problem of causality detection as a supervised learning task, by proposing a classification-based approach. A classifier is trained to identify causal interactions between time series for the chosen model and by means of a proposed feature space. In this paper, we are interested in comparing this classification-based approach with the standard Geweke measure of causality in the time domain, through simulation study. Thus, we customized our approach to the case of a MAR model and designed a feature space which contains causality measures based on the idea of precedence and predictability in time. Two variations of the supervised method are proposed and compared to a standard Granger causal analysis method. The results of the simulations show that the supervised method outperforms the standard approach, in particular it is more robust to noise. As evidence of the efficacy of the proposed method, we report the details of our submission to the causality detection competition of Biomag2014, where the proposed method reached the 2nd place. Moreover, as empirical application, we applied the supervised approach on a dataset of neural recordings of rats obtaining an important reduction in the false positive rate

Network Model Selection for Task-Focused Attributed Network Inference

Networks are models representing relationships between entities. Often these relationships are explicitly given, or we must learn a representation which generalizes and predicts observed behavior in underlying individual data (e.g. attributes or labels). Whether given or inferred, choosing the best representation affects subsequent tasks and questions on the network. This work focuses on model selection to evaluate network representations from data, focusing on fundamental predictive tasks on networks. We present a modular methodology using general, interpretable network models, task neighborhood functions found across domains, and several criteria for robust model selection. We demonstrate our methodology on three online user activity datasets and show that network model selection for the appropriate network task vs. an alternate task increases performance by an order of magnitude in our experiments

Moving forward with combinatorial interaction testing

Combinatorial interaction testing (CIT) is an efficient and effective method of detecting failures that are caused by the interactions of various system input parameters. In this paper, we discuss CIT, point out some of the difficulties of applying it in practice, and highlight some recent advances that have improved CIT’s applicability to modern systems. We also provide a roadmap for future research and directions; one that we hope will lead to new CIT research and to higher quality testing of industrial systems

Going Deeper with Semantics: Video Activity Interpretation using Semantic Contextualization

A deeper understanding of video activities extends beyond recognition of underlying concepts such as actions and objects: constructing deep semantic representations requires reasoning about the semantic relationships among these concepts, often beyond what is directly observed in the data. To this end, we propose an energy minimization framework that leverages large-scale commonsense knowledge bases, such as ConceptNet, to provide contextual cues to establish semantic relationships among entities directly hypothesized from video signal. We mathematically express this using the language of Grenander's canonical pattern generator theory. We show that the use of prior encoded commonsense knowledge alleviate the need for large annotated training datasets and help tackle imbalance in training through prior knowledge. Using three different publicly available datasets - Charades, Microsoft Visual Description Corpus and Breakfast Actions datasets, we show that the proposed model can generate video interpretations whose quality is better than those reported by state-of-the-art approaches, which have substantial training needs. Through extensive experiments, we show that the use of commonsense knowledge from ConceptNet allows the proposed approach to handle various challenges such as training data imbalance, weak features, and complex semantic relationships and visual scenes.Comment: Accepted to WACV 201

Time-Space Efficient Regression Testing for Configurable Systems

Configurable systems are those that can be adapted from a set of options. They are prevalent and testing them is important and challenging. Existing approaches for testing configurable systems are either unsound (i.e., they can miss fault-revealing configurations) or do not scale. This paper proposes EvoSPLat, a regression testing technique for configurable systems. EvoSPLat builds on our previously-developed technique, SPLat, which explores all dynamically reachable configurations from a test. EvoSPLat is tuned for two scenarios of use in regression testing: Regression Configuration Selection (RCS) and Regression Test Selection (RTS). EvoSPLat for RCS prunes configurations (not tests) that are not impacted by changes whereas EvoSPLat for RTS prunes tests (not configurations) which are not impacted by changes. Handling both scenarios in the context of evolution is important. Experimental results show that EvoSPLat is promising. We observed a substantial reduction in time (22%) and in the number of configurations (45%) for configurable Java programs. In a case study on a large real-world configurable system (GCC), EvoSPLat reduced 35% of the running time. Comparing EvoSPLat with sampling techniques, 2-wise was the most efficient technique, but it missed two bugs whereas EvoSPLat detected all bugs four times faster than 6-wise, on average.Comment: 14 page