Non-adaptive pooling strategies for detection of rare faulty items

We study non-adaptive pooling strategies for detection of rare faulty items. Given a binary sparse N-dimensional signal x, how to construct a sparse binary MxN pooling matrix F such that the signal can be reconstructed from the smallest possible number M of measurements y=Fx? We show that a very low number of measurements is possible for random spatially coupled design of pools F. Our design might find application in genetic screening or compressed genotyping. We show that our results are robust with respect to the uncertainty in the matrix F when some elements are mistaken.Comment: 5 page

Optimal Query Complexity for Reconstructing Hypergraphs

In this paper we consider the problem of reconstructing a hidden weighted hypergraph of constant rank using additive queries. We prove the following: Let $G$ be a weighted hidden hypergraph of constant rank with n vertices and $m$ hyperedges. For any $m$ there exists a non-adaptive algorithm that finds the edges of the graph and their weights using $$O(\frac{m\log n}{\log m})$$ additive queries. This solves the open problem in [S. Choi, J. H. Kim. Optimal Query Complexity Bounds for Finding Graphs. {\em STOC}, 749--758,~2008]. When the weights of the hypergraph are integers that are less than $O(poly(n^d/m))$ where $d$ is the rank of the hypergraph (and therefore for unweighted hypergraphs) there exists a non-adaptive algorithm that finds the edges of the graph and their weights using $$O(\frac{m\log \frac{n^d}{m}}{\log m}).$$ additive queries. Using the information theoretic bound the above query complexities are tight