26,329 research outputs found
Ball-Scale Based Hierarchical Multi-Object Recognition in 3D Medical Images
This paper investigates, using prior shape models and the concept of ball
scale (b-scale), ways of automatically recognizing objects in 3D images without
performing elaborate searches or optimization. That is, the goal is to place
the model in a single shot close to the right pose (position, orientation, and
scale) in a given image so that the model boundaries fall in the close vicinity
of object boundaries in the image. This is achieved via the following set of
key ideas: (a) A semi-automatic way of constructing a multi-object shape model
assembly. (b) A novel strategy of encoding, via b-scale, the pose relationship
between objects in the training images and their intensity patterns captured in
b-scale images. (c) A hierarchical mechanism of positioning the model, in a
one-shot way, in a given image from a knowledge of the learnt pose relationship
and the b-scale image of the given image to be segmented. The evaluation
results on a set of 20 routine clinical abdominal female and male CT data sets
indicate the following: (1) Incorporating a large number of objects improves
the recognition accuracy dramatically. (2) The recognition algorithm can be
thought as a hierarchical framework such that quick replacement of the model
assembly is defined as coarse recognition and delineation itself is known as
finest recognition. (3) Scale yields useful information about the relationship
between the model assembly and any given image such that the recognition
results in a placement of the model close to the actual pose without doing any
elaborate searches or optimization. (4) Effective object recognition can make
delineation most accurate.Comment: This paper was published and presented in SPIE Medical Imaging 201
A multi-view approach to cDNA micro-array analysis
The official published version can be obtained from the link below.Microarray has emerged as a powerful technology that enables biologists to study thousands of genes simultaneously, therefore, to obtain a better understanding of the gene interaction and regulation mechanisms. This paper is concerned with improving the processes involved in the analysis of microarray image data. The main focus is to clarify an image's feature space in an unsupervised manner. In this paper, the Image Transformation Engine (ITE), combined with different filters, is investigated. The proposed methods are applied to a set of real-world cDNA images. The MatCNN toolbox is used during the segmentation process. Quantitative comparisons between different filters are carried out. It is shown that the CLD filter is the best one to be applied with the ITE.This work was supported in part by the Engineering and Physical Sciences Research
Council (EPSRC) of the UK under Grant GR/S27658/01, the National Science Foundation of China under Innovative Grant 70621001, Chinese Academy of Sciences
under Innovative Group Overseas Partnership Grant, the BHP Billiton Cooperation of Australia Grant, the International Science and Technology Cooperation Project of China
under Grant 2009DFA32050 and the Alexander von Humboldt Foundation of Germany
Retinal Vessel Segmentation Using the 2-D Morlet Wavelet and Supervised Classification
We present a method for automated segmentation of the vasculature in retinal
images. The method produces segmentations by classifying each image pixel as
vessel or non-vessel, based on the pixel's feature vector. Feature vectors are
composed of the pixel's intensity and continuous two-dimensional Morlet wavelet
transform responses taken at multiple scales. The Morlet wavelet is capable of
tuning to specific frequencies, thus allowing noise filtering and vessel
enhancement in a single step. We use a Bayesian classifier with
class-conditional probability density functions (likelihoods) described as
Gaussian mixtures, yielding a fast classification, while being able to model
complex decision surfaces and compare its performance with the linear minimum
squared error classifier. The probability distributions are estimated based on
a training set of labeled pixels obtained from manual segmentations. The
method's performance is evaluated on publicly available DRIVE and STARE
databases of manually labeled non-mydriatic images. On the DRIVE database, it
achieves an area under the receiver operating characteristic (ROC) curve of
0.9598, being slightly superior than that presented by the method of Staal et
al.Comment: 9 pages, 7 figures and 1 table. Accepted for publication in IEEE
Trans Med Imag; added copyright notic
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