Random Graph Generator for Bipartite Networks Modeling

The purpose of this article is to introduce a new iterative algorithm with properties resembling real life bipartite graphs. The algorithm enables us to generate wide range of random bigraphs, which features are determined by a set of parameters.We adapt the advances of last decade in unipartite complex networks modeling to the bigraph setting. This data structure can be observed in several situations. However, only a few datasets are freely available to test the algorithms (e.g. community detection, influential nodes identification, information retrieval) which operate on such data. Therefore, artificial datasets are needed to enhance development and testing of the algorithms. We are particularly interested in applying the generator to the analysis of recommender systems. Therefore, we focus on two characteristics that, besides simple statistics, are in our opinion responsible for the performance of neighborhood based collaborative filtering algorithms. The features are node degree distribution and local clustering coeficient

Variational Inference for Stochastic Block Models from Sampled Data

This paper deals with non-observed dyads during the sampling of a network and consecutive issues in the inference of the Stochastic Block Model (SBM). We review sampling designs and recover Missing At Random (MAR) and Not Missing At Random (NMAR) conditions for the SBM. We introduce variants of the variational EM algorithm for inferring the SBM under various sampling designs (MAR and NMAR) all available as an R package. Model selection criteria based on Integrated Classification Likelihood are derived for selecting both the number of blocks and the sampling design. We investigate the accuracy and the range of applicability of these algorithms with simulations. We explore two real-world networks from ethnology (seed circulation network) and biology (protein-protein interaction network), where the interpretations considerably depends on the sampling designs considered

Topics in social network analysis and network science

This chapter introduces statistical methods used in the analysis of social networks and in the rapidly evolving parallel-field of network science. Although several instances of social network analysis in health services research have appeared recently, the majority involve only the most basic methods and thus scratch the surface of what might be accomplished. Cutting-edge methods using relevant examples and illustrations in health services research are provided

Tunable and Growing Network Generation Model with Community Structures

Recent years have seen a growing interest in the modeling and simulation of social networks to understand several social phenomena. Two important classes of networks, small world and scale free networks have gained a lot of research interest. Another important characteristic of social networks is the presence of community structures. Many social processes such as information diffusion and disease epidemics depend on the presence of community structures making it an important property for network generation models to be incorporated. In this paper, we present a tunable and growing network generation model with small world and scale free properties as well as the presence of community structures. The major contribution of this model is that the communities thus created satisfy three important structural properties: connectivity within each community follows power-law, communities have high clustering coefficient and hierarchical community structures are present in the networks generated using the proposed model. Furthermore, the model is highly robust and capable of producing networks with a number of different topological characteristics varying clustering coefficient and inter-cluster edges. Our simulation results show that the model produces small world and scale free networks along with the presence of communities depicting real world societies and social networks.Comment: Social Computing and Its Applications, SCA 13, Karlsruhe : Germany (2013

Statistical clustering of temporal networks through a dynamic stochastic block model

Statistical node clustering in discrete time dynamic networks is an emerging field that raises many challenges. Here, we explore statistical properties and frequentist inference in a model that combines a stochastic block model (SBM) for its static part with independent Markov chains for the evolution of the nodes groups through time. We model binary data as well as weighted dynamic random graphs (with discrete or continuous edges values). Our approach, motivated by the importance of controlling for label switching issues across the different time steps, focuses on detecting groups characterized by a stable within group connectivity behavior. We study identifiability of the model parameters, propose an inference procedure based on a variational expectation maximization algorithm as well as a model selection criterion to select for the number of groups. We carefully discuss our initialization strategy which plays an important role in the method and compare our procedure with existing ones on synthetic datasets. We also illustrate our approach on dynamic contact networks, one of encounters among high school students and two others on animal interactions. An implementation of the method is available as a R package called dynsbm