9,842 research outputs found
Performance Characterization of Multi-threaded Graph Processing Applications on Intel Many-Integrated-Core Architecture
Intel Xeon Phi many-integrated-core (MIC) architectures usher in a new era of
terascale integration. Among emerging killer applications, parallel graph
processing has been a critical technique to analyze connected data. In this
paper, we empirically evaluate various computing platforms including an Intel
Xeon E5 CPU, a Nvidia Geforce GTX1070 GPU and an Xeon Phi 7210 processor
codenamed Knights Landing (KNL) in the domain of parallel graph processing. We
show that the KNL gains encouraging performance when processing graphs, so that
it can become a promising solution to accelerating multi-threaded graph
applications. We further characterize the impact of KNL architectural
enhancements on the performance of a state-of-the art graph framework.We have
four key observations: 1 Different graph applications require distinctive
numbers of threads to reach the peak performance. For the same application,
various datasets need even different numbers of threads to achieve the best
performance. 2 Only a few graph applications benefit from the high bandwidth
MCDRAM, while others favor the low latency DDR4 DRAM. 3 Vector processing units
executing AVX512 SIMD instructions on KNLs are underutilized when running the
state-of-the-art graph framework. 4 The sub-NUMA cache clustering mode offering
the lowest local memory access latency hurts the performance of graph
benchmarks that are lack of NUMA awareness. At last, We suggest future works
including system auto-tuning tools and graph framework optimizations to fully
exploit the potential of KNL for parallel graph processing.Comment: published as L. Jiang, L. Chen and J. Qiu, "Performance
Characterization of Multi-threaded Graph Processing Applications on
Many-Integrated-Core Architecture," 2018 IEEE International Symposium on
Performance Analysis of Systems and Software (ISPASS), Belfast, United
Kingdom, 2018, pp. 199-20
Sparse Allreduce: Efficient Scalable Communication for Power-Law Data
Many large datasets exhibit power-law statistics: The web graph, social
networks, text data, click through data etc. Their adjacency graphs are termed
natural graphs, and are known to be difficult to partition. As a consequence
most distributed algorithms on these graphs are communication intensive. Many
algorithms on natural graphs involve an Allreduce: a sum or average of
partitioned data which is then shared back to the cluster nodes. Examples
include PageRank, spectral partitioning, and many machine learning algorithms
including regression, factor (topic) models, and clustering. In this paper we
describe an efficient and scalable Allreduce primitive for power-law data. We
point out scaling problems with existing butterfly and round-robin networks for
Sparse Allreduce, and show that a hybrid approach improves on both.
Furthermore, we show that Sparse Allreduce stages should be nested instead of
cascaded (as in the dense case). And that the optimum throughput Allreduce
network should be a butterfly of heterogeneous degree where degree decreases
with depth into the network. Finally, a simple replication scheme is introduced
to deal with node failures. We present experiments showing significant
improvements over existing systems such as PowerGraph and Hadoop
IPC: A Benchmark Data Set for Learning with Graph-Structured Data
Benchmark data sets are an indispensable ingredient of the evaluation of
graph-based machine learning methods. We release a new data set, compiled from
International Planning Competitions (IPC), for benchmarking graph
classification, regression, and related tasks. Apart from the graph
construction (based on AI planning problems) that is interesting in its own
right, the data set possesses distinctly different characteristics from
popularly used benchmarks. The data set, named IPC, consists of two
self-contained versions, grounded and lifted, both including graphs of large
and skewedly distributed sizes, posing substantial challenges for the
computation of graph models such as graph kernels and graph neural networks.
The graphs in this data set are directed and the lifted version is acyclic,
offering the opportunity of benchmarking specialized models for directed
(acyclic) structures. Moreover, the graph generator and the labeling are
computer programmed; thus, the data set may be extended easily if a larger
scale is desired. The data set is accessible from
\url{https://github.com/IBM/IPC-graph-data}.Comment: ICML 2019 Workshop on Learning and Reasoning with Graph-Structured
Data. The data set is accessible from https://github.com/IBM/IPC-graph-dat
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