Robust saliency detection via regularized random walks ranking

In the field of saliency detection, many graph-based algorithms heavily depend on the accuracy of the pre-processed superpixel segmentation, which leads to significant sacrifice of detail information from the input image. In this paper, we propose a novel bottom-up saliency detection approach that takes advantage of both region-based features and image details. To provide more accurate saliency estimations, we first optimize the image boundary selection by the proposed erroneous boundary removal. By taking the image details and region-based estimations into account, we then propose the regularized random walks ranking to formulate pixel-wised saliency maps from the superpixel-based background and foreground saliency estimations. Experiment results on two public datasets indicate the significantly improved accuracy and robustness of the proposed algorithm in comparison with 12 state-of-the-art saliency detection approaches

Joint stage recognition and anatomical annotation of drosophila gene expression patterns

Motivation: Staining the mRNA of a gene via in situ hybridization (ISH) during the development of a Drosophila melanogaster embryo delivers the detailed spatio-temporal patterns of the gene expression. Many related biological problems such as the detection of co-expressed genes, co-regulated genes and transcription factor binding motifs rely heavily on the analysis of these image patterns. To provide the text-based pattern searching for facilitating related biological studies, the images in the Berkeley Drosophila Genome Project (BDGP) study are annotated with developmental stage term and anatomical ontology terms manually by domain experts. Due to the rapid increase in the number of such images and the inevitable bias annotations by human curators, it is necessary to develop an automatic method to recognize the developmental stage and annotate anatomical terms

Sub-Markov random walk for image segmentation

A novel sub-Markov random walk (subRW) algorithm with label prior is proposed for seeded image segmentation, which can be interpreted as a traditional random walker on a graph with added auxiliary nodes. Under this explanation, we unify the proposed subRW and other popular random walk (RW) algorithms. This unifying view will make it possible for transferring intrinsic findings between different RW algorithms, and offer new ideas for designing novel RW algorithms by adding or changing auxiliary nodes. To verify the second benefit, we design a new subRW algorithm with label prior to solve the segmentation problem of objects with thin and elongated parts. The experimental results on both synthetic and natural images with twigs demonstrate that the proposed subRW method outperforms previous RW algorithms for seeded image segmentation