41,392 research outputs found
Graph Few-shot Learning via Knowledge Transfer
Towards the challenging problem of semi-supervised node classification, there
have been extensive studies. As a frontier, Graph Neural Networks (GNNs) have
aroused great interest recently, which update the representation of each node
by aggregating information of its neighbors. However, most GNNs have shallow
layers with a limited receptive field and may not achieve satisfactory
performance especially when the number of labeled nodes is quite small. To
address this challenge, we innovatively propose a graph few-shot learning (GFL)
algorithm that incorporates prior knowledge learned from auxiliary graphs to
improve classification accuracy on the target graph. Specifically, a
transferable metric space characterized by a node embedding and a
graph-specific prototype embedding function is shared between auxiliary graphs
and the target, facilitating the transfer of structural knowledge. Extensive
experiments and ablation studies on four real-world graph datasets demonstrate
the effectiveness of our proposed model.Comment: Full paper (with Appendix) of AAAI 202
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery
Representation learning provides new and powerful graph analytical approaches
and tools for the highly valued data science challenge of mining knowledge
graphs. Since previous graph analytical methods have mostly focused on
homogeneous graphs, an important current challenge is extending this
methodology for richly heterogeneous graphs and knowledge domains. The
biomedical sciences are such a domain, reflecting the complexity of biology,
with entities such as genes, proteins, drugs, diseases, and phenotypes, and
relationships such as gene co-expression, biochemical regulation, and
biomolecular inhibition or activation. Therefore, the semantics of edges and
nodes are critical for representation learning and knowledge discovery in real
world biomedical problems. In this paper, we propose the edge2vec model, which
represents graphs considering edge semantics. An edge-type transition matrix is
trained by an Expectation-Maximization approach, and a stochastic gradient
descent model is employed to learn node embedding on a heterogeneous graph via
the trained transition matrix. edge2vec is validated on three biomedical domain
tasks: biomedical entity classification, compound-gene bioactivity prediction,
and biomedical information retrieval. Results show that by considering
edge-types into node embedding learning in heterogeneous graphs,
\textbf{edge2vec}\ significantly outperforms state-of-the-art models on all
three tasks. We propose this method for its added value relative to existing
graph analytical methodology, and in the real world context of biomedical
knowledge discovery applicability.Comment: 10 page
From Word to Sense Embeddings: A Survey on Vector Representations of Meaning
Over the past years, distributed semantic representations have proved to be
effective and flexible keepers of prior knowledge to be integrated into
downstream applications. This survey focuses on the representation of meaning.
We start from the theoretical background behind word vector space models and
highlight one of their major limitations: the meaning conflation deficiency,
which arises from representing a word with all its possible meanings as a
single vector. Then, we explain how this deficiency can be addressed through a
transition from the word level to the more fine-grained level of word senses
(in its broader acceptation) as a method for modelling unambiguous lexical
meaning. We present a comprehensive overview of the wide range of techniques in
the two main branches of sense representation, i.e., unsupervised and
knowledge-based. Finally, this survey covers the main evaluation procedures and
applications for this type of representation, and provides an analysis of four
of its important aspects: interpretability, sense granularity, adaptability to
different domains and compositionality.Comment: 46 pages, 8 figures. Published in Journal of Artificial Intelligence
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