Representing and Inferring Visual Perceptual Skills in Dermatological Image Understanding

Experts have a remarkable capability of locating, perceptually organizing, identifying, and categorizing objects in images specific to their domains of expertise. Eliciting and representing their visual strategies and some aspects of domain knowledge will benefit a wide range of studies and applications. For example, image understanding may be improved through active learning frameworks by transferring human domain knowledge into image-based computational procedures, intelligent user interfaces enhanced by inferring dynamic informational needs in real time, and cognitive processing analyzed via unveiling the engaged underlying cognitive processes. An eye tracking experiment was conducted to collect both eye movement and verbal narrative data from three groups of subjects with different medical training levels or no medical training in order to study perceptual skill. Each subject examined and described 50 photographical dermatological images. One group comprised 11 board-certified dermatologists (attendings), another group was 4 dermatologists in training (residents), and the third group 13 novices (undergraduate students with no medical training). We develop a novel hierarchical probabilistic framework to discover the stereotypical and idiosyncratic viewing behaviors exhibited by the three expertise-specific groups. A hidden Markov model is used to describe each subject\u27s eye movement sequence combined with hierarchical stochastic processes to capture and differentiate the discovered eye movement patterns shared by multiple subjects\u27 eye movement sequences within and among the three expertise-specific groups. Through these patterned eye movement behaviors we are able to elicit some aspects of the domain-specific knowledge and perceptual skill from the subjects whose eye movements are recorded during diagnostic reasoning processes on medical images. Analyzing experts\u27 eye movement patterns provides us insight into cognitive strategies exploited to solve complex perceptual reasoning tasks. Independent experts\u27 annotations of diagnostic conceptual units of thought in the transcribed verbal narratives are time-aligned with discovered eye movement patterns to help interpret the patterns\u27 meanings. By mapping eye movement patterns to thought units, we uncover the relationships between visual and linguistic elements of their reasoning and perceptual processes, and show the manner in which these subjects varied their behaviors while parsing the images

Adaptation Algorithms for Neural Network-Based Speech Recognition: An Overview

We present a structured overview of adaptation algorithms for neural network-based speech recognition, considering both hybrid hidden Markov model / neural network systems and end-to-end neural network systems, with a focus on speaker adaptation, domain adaptation, and accent adaptation. The overview characterizes adaptation algorithms as based on embeddings, model parameter adaptation, or data augmentation. We present a meta-analysis of the performance of speech recognition adaptation algorithms, based on relative error rate reductions as reported in the literature.Comment: Submitted to IEEE Open Journal of Signal Processing. 30 pages, 27 figure

Acoustic sensor network geometry calibration and applications

In the modern world, we are increasingly surrounded by computation devices with communication links and one or more microphones. Such devices are, for example, smartphones, tablets, laptops or hearing aids. These devices can work together as nodes in an acoustic sensor network (ASN). Such networks are a growing platform that opens the possibility for many practical applications. ASN based speech enhancement, source localization, and event detection can be applied for teleconferencing, camera control, automation, or assisted living. For this kind of applications, the awareness of auditory objects and their spatial positioning are key properties. In order to provide these two kinds of information, novel methods have been developed in this thesis. Information on the type of auditory objects is provided by a novel real-time sound classification method. Information on the position of human speakers is provided by a novel localization and tracking method. In order to localize with respect to the ASN, the relative arrangement of the sensor nodes has to be known. Therefore, different novel geometry calibration methods were developed. Sound classification The first method addresses the task of identification of auditory objects. A novel application of the bag-of-features (BoF) paradigm on acoustic event classification and detection was introduced. It can be used for event and speech detection as well as for speaker identification. The use of both mel frequency cepstral coefficient (MFCC) and Gammatone frequency cepstral coefficient (GFCC) features improves the classification accuracy. By using soft quantization and introducing supervised training for the BoF model, superior accuracy is achieved. The method generalizes well from limited training data. It is working online and can be computed in a fraction of real-time. By a dedicated training strategy based on a hierarchy of stationarity, the detection of speech in mixtures with noise was realized. This makes the method robust against severe noises levels corrupting the speech signal. Thus it is possible to provide control information to a beamformer in order to realize blind speech enhancement. A reliable improvement is achieved in the presence of one or more stationary noise sources. Speaker localization The localization method enables each node to determine the direction of arrival (DoA) of concurrent sound sources. The author's neuro-biologically inspired speaker localization method for microphone arrays was refined for the use in ASNs. By implementing a dedicated cochlear and midbrain model, it is robust against the reverberation found in indoor rooms. In order to better model the unknown number of concurrent speakers, an application of the EM algorithm that realizes probabilistic clustering according to auditory scene analysis (ASA) principles was introduced. Based on this approach, a system for Euclidean tracking in ASNs was designed. Each node applies the node wise localization method and shares probabilistic DoA estimates together with an estimate of the spectral distribution with the network. As this information is relatively sparse, it can be transmitted with low bandwidth. The system is robust against jitter and transmission errors. The information from all nodes is integrated according to spectral similarity to correctly associate concurrent speakers. By incorporating the intersection angle in the triangulation, the precision of the Euclidean localization is improved. Tracks of concurrent speakers are computed over time, as is shown with recordings in a reverberant room. Geometry calibration The central task of geometry calibration has been solved with special focus on sensor nodes equipped with multiple microphones. Novel methods were developed for different scenarios. An audio-visual method was introduced for the calibration of ASNs in video conferencing scenarios. The DoAs estimates are fused with visual speaker tracking in order to provide sensor positions in a common coordinate system. A novel acoustic calibration method determines the relative positioning of the nodes from ambient sounds alone. Unlike previous methods that only infer the positioning of distributed microphones, the DoA is incorporated and thus it becomes possible to calibrate the orientation of the nodes with a high accuracy. This is very important for all applications using the spatial information, as the triangulation error increases dramatically with bad orientation estimates. As speech events can be used, the calibration becomes possible without the requirement of playing dedicated calibration sounds. Based on this, an online method employing a genetic algorithm with incremental measurements was introduced. By using the robust speech localization method, the calibration is computed in parallel to the tracking. The online method is be able to calibrate ASNs in real time, as is shown with recordings of natural speakers in a reverberant room. The informed acoustic sensor network All new methods are important building blocks for the use of ASNs. The online methods for localization and calibration both make use of the neuro-biologically inspired processing in the nodes which leads to state-of-the-art results, even in reverberant enclosures. The high robustness and reliability can be improved even more by including the event detection method in order to exclude non-speech events. When all methods are combined, both semantic information on what is happening in the acoustic scene as well as spatial information on the positioning of the speakers and sensor nodes is automatically acquired in real time. This realizes truly informed audio processing in ASNs. Practical applicability is shown by application to recordings in reverberant rooms. The contribution of this thesis is thus not only to advance the state-of-the-art in automatically acquiring information on the acoustic scene, but also pushing the practical applicability of such methods

Dagstuhl News January - December 2008

"Dagstuhl News" is a publication edited especially for the members of the Foundation "Informatikzentrum Schloss Dagstuhl" to thank them for their support. The News give a summary of the scientific work being done in Dagstuhl. Each Dagstuhl Seminar is presented by a small abstract describing the contents and scientific highlights of the seminar as well as the perspectives or challenges of the research topic

Deep learning in food category recognition

Integrating artificial intelligence with food category recognition has been a field of interest for research for the past few decades. It is potentially one of the next steps in revolutionizing human interaction with food. The modern advent of big data and the development of data-oriented fields like deep learning have provided advancements in food category recognition. With increasing computational power and ever-larger food datasets, the approach’s potential has yet to be realized. This survey provides an overview of methods that can be applied to various food category recognition tasks, including detecting type, ingredients, quality, and quantity. We survey the core components for constructing a machine learning system for food category recognition, including datasets, data augmentation, hand-crafted feature extraction, and machine learning algorithms. We place a particular focus on the field of deep learning, including the utilization of convolutional neural networks, transfer learning, and semi-supervised learning. We provide an overview of relevant studies to promote further developments in food category recognition for research and industrial applicationsMRC (MC_PC_17171)Royal Society (RP202G0230)BHF (AA/18/3/34220)Hope Foundation for Cancer Research (RM60G0680)GCRF (P202PF11)Sino-UK Industrial Fund (RP202G0289)LIAS (P202ED10Data Science Enhancement Fund (P202RE237)Fight for Sight (24NN201);Sino-UK Education Fund (OP202006)BBSRC (RM32G0178B8

An investigation of the utility of monaural sound source separation via nonnegative matrix factorization applied to acoustic echo and reverberation mitigation for hands-free telephony

In this thesis we investigate the applicability and utility of Monaural Sound Source Separation (MSSS) via Nonnegative Matrix Factorization (NMF) for various problems related to audio for hands-free telephony. We first investigate MSSS via NMF as an alternative acoustic echo reduction approach to existing approaches such as Acoustic Echo Cancellation (AEC). To this end, we present the single-channel acoustic echo problem as an MSSS problem, in which the objective is to extract the users signal from a mixture also containing acoustic echo and noise. To perform separation, NMF is used to decompose the near-end microphone signal onto the union of two nonnegative bases in the magnitude Short Time Fourier Transform domain. One of these bases is for the spectral energy of the acoustic echo signal, and is formed from the in- coming far-end user’s speech, while the other basis is for the spectral energy of the near-end speaker, and is trained with speech data a priori. In comparison to AEC, the speaker extraction approach obviates Double-Talk Detection (DTD), and is demonstrated to attain its maximal echo mitigation performance immediately upon initiation and to maintain that performance during and after room changes for similar computational requirements. Speaker extraction is also shown to introduce distortion of the near-end speech signal during double-talk, which is quantified by means of a speech distortion measure and compared to that of AEC. Subsequently, we address Double-Talk Detection (DTD) for block-based AEC algorithms. We propose a novel block-based DTD algorithm that uses the available signals and the estimate of the echo signal that is produced by NMF-based speaker extraction to compute a suitably normalized correlation-based decision variable, which is compared to a fixed threshold to decide on doubletalk. Using a standard evaluation technique, the proposed algorithm is shown to have comparable detection performance to an existing conventional block-based DTD algorithm. It is also demonstrated to inherit the room change insensitivity of speaker extraction, with the proposed DTD algorithm generating minimal false doubletalk indications upon initiation and in response to room changes in comparison to the existing conventional DTD. We also show that this property allows its paired AEC to converge at a rate close to the optimum. Another focus of this thesis is the problem of inverting a single measurement of a non- minimum phase Room Impulse Response (RIR). We describe the process by which percep- tually detrimental all-pass phase distortion arises in reverberant speech filtered by the inverse of the minimum phase component of the RIR; in short, such distortion arises from inverting the magnitude response of the high-Q maximum phase zeros of the RIR. We then propose two novel partial inversion schemes that precisely mitigate this distortion. One of these schemes employs NMF-based MSSS to separate the all-pass phase distortion from the target speech in the magnitude STFT domain, while the other approach modifies the inverse minimum phase filter such that the magnitude response of the maximum phase zeros of the RIR is not fully compensated. Subjective listening tests reveal that the proposed schemes generally produce better quality output speech than a comparable inversion technique

An investigation of the utility of monaural sound source separation via nonnegative matrix factorization applied to acoustic echo and reverberation mitigation for hands-free telephony

In this thesis we investigate the applicability and utility of Monaural Sound Source Separation (MSSS) via Nonnegative Matrix Factorization (NMF) for various problems related to audio for hands-free telephony. We first investigate MSSS via NMF as an alternative acoustic echo reduction approach to existing approaches such as Acoustic Echo Cancellation (AEC). To this end, we present the single-channel acoustic echo problem as an MSSS problem, in which the objective is to extract the users signal from a mixture also containing acoustic echo and noise. To perform separation, NMF is used to decompose the near-end microphone signal onto the union of two nonnegative bases in the magnitude Short Time Fourier Transform domain. One of these bases is for the spectral energy of the acoustic echo signal, and is formed from the in- coming far-end user’s speech, while the other basis is for the spectral energy of the near-end speaker, and is trained with speech data a priori. In comparison to AEC, the speaker extraction approach obviates Double-Talk Detection (DTD), and is demonstrated to attain its maximal echo mitigation performance immediately upon initiation and to maintain that performance during and after room changes for similar computational requirements. Speaker extraction is also shown to introduce distortion of the near-end speech signal during double-talk, which is quantified by means of a speech distortion measure and compared to that of AEC. Subsequently, we address Double-Talk Detection (DTD) for block-based AEC algorithms. We propose a novel block-based DTD algorithm that uses the available signals and the estimate of the echo signal that is produced by NMF-based speaker extraction to compute a suitably normalized correlation-based decision variable, which is compared to a fixed threshold to decide on doubletalk. Using a standard evaluation technique, the proposed algorithm is shown to have comparable detection performance to an existing conventional block-based DTD algorithm. It is also demonstrated to inherit the room change insensitivity of speaker extraction, with the proposed DTD algorithm generating minimal false doubletalk indications upon initiation and in response to room changes in comparison to the existing conventional DTD. We also show that this property allows its paired AEC to converge at a rate close to the optimum. Another focus of this thesis is the problem of inverting a single measurement of a non- minimum phase Room Impulse Response (RIR). We describe the process by which percep- tually detrimental all-pass phase distortion arises in reverberant speech filtered by the inverse of the minimum phase component of the RIR; in short, such distortion arises from inverting the magnitude response of the high-Q maximum phase zeros of the RIR. We then propose two novel partial inversion schemes that precisely mitigate this distortion. One of these schemes employs NMF-based MSSS to separate the all-pass phase distortion from the target speech in the magnitude STFT domain, while the other approach modifies the inverse minimum phase filter such that the magnitude response of the maximum phase zeros of the RIR is not fully compensated. Subjective listening tests reveal that the proposed schemes generally produce better quality output speech than a comparable inversion technique