4 research outputs found

    Increasing Incidence Within PubMed of the Use of the Misspelling Pruritis (Sic) Instead of Pruritus for Itch

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    Writers generally benefit from word processing technology, and the use of other forms of formal writing such as typewriters is archaic. The first stand-alone spell checker programs originated in the early 1980s, and by 1995 they were embedded within word processing programs such as Word 95 (1). With the ubiquity of such software, spelling errors in the medical literature should be extinct. Yet, as a reader of the medical literature with an interest in itch, this author is impressed with the numbers of misspellings of the word «pruritus.» The word pruritus is derived from the Latin pruritus, past participle of prurire “to itch” (2) To assess the frequency and characteristics of the misspellings of this word, a PubMed search was undertaken

    Automated Proof Reading of Clinical Notes

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    Real-time classifiers from free-text for continuous surveillance of small animal disease

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    A wealth of information of epidemiological importance is held within unstructured narrative clinical records. Text mining provides computational techniques for extracting usable information from the language used to communicate between humans, including the spoken and written word. The aim of this work was to develop text-mining methodologies capable of rendering the large volume of information within veterinary clinical narratives accessible for research and surveillance purposes. The free-text records collated within the dataset of the Small Animal Veterinary Surveillance Network formed the development material and target of this work. The efficacy of pre-existent clinician-assigned coding applied to the dataset was evaluated and the nature of notation and vocabulary used in documenting consultations was explored and described. Consultation records were pre-processed to improve human and software readability, and software was developed to redact incidental identifiers present within the free-text. An automated system able to classify for the presence of clinical signs, utilising only information present within the free-text record, was developed with the aim that it would facilitate timely detection of spatio-temporal trends in clinical signs. Clinician-assigned main reason for visit coding provided a poor summary of the large quantity of information exchanged during a veterinary consultation and the nature of the coding and questionnaire triggering further obfuscated information. Delineation of the previously undocumented veterinary clinical sublanguage identified common themes and their manner of documentation, this was key to the development of programmatic methods. A rule-based classifier using logically-chosen dictionaries, sequential processing and data-masking redacted identifiers while maintaining research usability of records. Highly sensitive and specific free-text classification was achieved by applying classifiers for individual clinical signs within a context-sensitive scaffold, this permitted or prohibited matching dependent on the clinical context in which a clinical sign was documented. The mean sensitivity achieved within an unseen test dataset was 98.17 (74.47, 99.9)% and mean specificity 99.94 (77.1, 100.0)%. When used in combination to identify animals with any of a combination of gastrointestinal clinical signs, the sensitivity achieved was 99.44% (95% CI: 98.57, 99.78)% and specificity 99.74 (95% CI: 99.62, 99.83). This work illustrates the importance, utility and promise of free-text classification of clinical records and provides a framework within which this is possible whilst respecting the confidentiality of client and clinician
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