How to avoid potential pitfalls in recurrence plot based data analysis

Recurrence plots and recurrence quantification analysis have become popular in the last two decades. Recurrence based methods have on the one hand a deep foundation in the theory of dynamical systems and are on the other hand powerful tools for the investigation of a variety of problems. The increasing interest encompasses the growing risk of misuse and uncritical application of these methods. Therefore, we point out potential problems and pitfalls related to different aspects of the application of recurrence plots and recurrence quantification analysis

Recurrence Plot Based Measures of Complexity and its Application to Heart Rate Variability Data

The knowledge of transitions between regular, laminar or chaotic behavior is essential to understand the underlying mechanisms behind complex systems. While several linear approaches are often insufficient to describe such processes, there are several nonlinear methods which however require rather long time observations. To overcome these difficulties, we propose measures of complexity based on vertical structures in recurrence plots and apply them to the logistic map as well as to heart rate variability data. For the logistic map these measures enable us not only to detect transitions between chaotic and periodic states, but also to identify laminar states, i.e. chaos-chaos transitions. The traditional recurrence quantification analysis fails to detect the latter transitions. Applying our new measures to the heart rate variability data, we are able to detect and quantify the laminar phases before a life-threatening cardiac arrhythmia occurs thereby facilitating a prediction of such an event. Our findings could be of importance for the therapy of malignant cardiac arrhythmias

Non-Markov stochastic dynamics of real epidemic process of respiratory infections

The study of social networks and especially of the stochastic dynamics of the diseases spread in human population has recently attracted considerable attention in statistical physics. In this work we present a new statistical method of analyzing the spread of epidemic processes of grippe and acute respiratory track infections (ARTI) by means of the theory of discrete non-Markov stochastic processes. We use the results of our last theory (Phys. Rev. E 65, 046107 (2002)) to study statistical memory effects, long - range correlation and discreteness in real data series, describing the epidemic dynamics of human ARTI infections and grippe. We have carried out the comparative analysis of the data of the two infections (grippe and ARTI) in one of the industrial districts of Kazan, one of the largest cities of Russia. The experimental data are analyzed by the power spectra of the initial time correlation function and the memory functions of junior orders, the phase portraits of the four first dynamic variables, the three first points of the statistical non-Markov parameter and the locally averaged kinetic and relaxation parameters. The received results give an opportunity to provide strict quantitative description of the regular and stochastic components in epidemic dynamics of social networks taking into account their time discreteness and effects of statistical memory. They also allow to reveal the degree of randomness and predictability of the real epidemic process in the specific social network.Comment: 18 pages, 8figs, 1 table

Extended Recurrence Plot Analysis and its Application to ERP Data

We present new measures of complexity and their application to event related potential data. The new measures base on structures of recurrence plots and makes the identification of chaos-chaos transitions possible. The application of these measures to data from single-trials of the Oddball experiment can identify laminar states therein. This offers a new way of analyzing event-related activity on a single-trial basis.Comment: 21 pages, 8 figures; article for the workshop ''Analyzing and Modelling Event-Related Brain Potentials: Cognitive and Neural Approaches`` at November 29 - December 01, 2001 in Potsdam, German

Wavelet analysis of epileptic spikes

Interictal spikes and sharp waves in human EEG are characteristic signatures of epilepsy. These potentials originate as a result of synchronous, pathological discharge of many neurons. The reliable detection of such potentials has been the long standing problem in EEG analysis, especially after long-term monitoring became common in investigation of epileptic patients. The traditional definition of a spike is based on its amplitude, duration, sharpness, and emergence from its background. However, spike detection systems built solely around this definition are not reliable due to the presence of numerous transients and artifacts. We use wavelet transform to analyze the properties of EEG manifestations of epilepsy. We demonstrate that the behavior of wavelet transform of epileptic spikes across scales can constitute the foundation of a relatively simple yet effective detection algorithm.Comment: 4 pages, 3 figure