120,828 research outputs found
A Survey on Deep Learning in Medical Image Analysis
Deep learning algorithms, in particular convolutional networks, have rapidly
become a methodology of choice for analyzing medical images. This paper reviews
the major deep learning concepts pertinent to medical image analysis and
summarizes over 300 contributions to the field, most of which appeared in the
last year. We survey the use of deep learning for image classification, object
detection, segmentation, registration, and other tasks and provide concise
overviews of studies per application area. Open challenges and directions for
future research are discussed.Comment: Revised survey includes expanded discussion section and reworked
introductory section on common deep architectures. Added missed papers from
before Feb 1st 201
Deep Learning in Cardiology
The medical field is creating large amount of data that physicians are unable
to decipher and use efficiently. Moreover, rule-based expert systems are
inefficient in solving complicated medical tasks or for creating insights using
big data. Deep learning has emerged as a more accurate and effective technology
in a wide range of medical problems such as diagnosis, prediction and
intervention. Deep learning is a representation learning method that consists
of layers that transform the data non-linearly, thus, revealing hierarchical
relationships and structures. In this review we survey deep learning
application papers that use structured data, signal and imaging modalities from
cardiology. We discuss the advantages and limitations of applying deep learning
in cardiology that also apply in medicine in general, while proposing certain
directions as the most viable for clinical use.Comment: 27 pages, 2 figures, 10 table
Task Decomposition and Synchronization for Semantic Biomedical Image Segmentation
Semantic segmentation is essentially important to biomedical image analysis.
Many recent works mainly focus on integrating the Fully Convolutional Network
(FCN) architecture with sophisticated convolution implementation and deep
supervision. In this paper, we propose to decompose the single segmentation
task into three subsequent sub-tasks, including (1) pixel-wise image
segmentation, (2) prediction of the class labels of the objects within the
image, and (3) classification of the scene the image belonging to. While these
three sub-tasks are trained to optimize their individual loss functions of
different perceptual levels, we propose to let them interact by the task-task
context ensemble. Moreover, we propose a novel sync-regularization to penalize
the deviation between the outputs of the pixel-wise segmentation and the class
prediction tasks. These effective regularizations help FCN utilize context
information comprehensively and attain accurate semantic segmentation, even
though the number of the images for training may be limited in many biomedical
applications. We have successfully applied our framework to three diverse 2D/3D
medical image datasets, including Robotic Scene Segmentation Challenge 18
(ROBOT18), Brain Tumor Segmentation Challenge 18 (BRATS18), and Retinal Fundus
Glaucoma Challenge (REFUGE18). We have achieved top-tier performance in all
three challenges.Comment: IEEE Transactions on Medical Imagin
A Review on the Applications of Crowdsourcing in Human Pathology
The advent of the digital pathology has introduced new avenues of diagnostic
medicine. Among them, crowdsourcing has attracted researchers' attention in the
recent years, allowing them to engage thousands of untrained individuals in
research and diagnosis. While there exist several articles in this regard,
prior works have not collectively documented them. We, therefore, aim to review
the applications of crowdsourcing in human pathology in a semi-systematic
manner. We firstly, introduce a novel method to do a systematic search of the
literature. Utilizing this method, we, then, collect hundreds of articles and
screen them against a pre-defined set of criteria. Furthermore, we crowdsource
part of the screening process, to examine another potential application of
crowdsourcing. Finally, we review the selected articles and characterize the
prior uses of crowdsourcing in pathology
A review of research into the development of radiologic expertise: Implications for computer-based training
Rationale and Objectives. Studies of radiologic error reveal high levels of variation between radiologists. Although it is known that experts outperform novices, we have only limited knowledge about radiologic expertise and how it is acquired.Materials and Methods. This review identifies three areas of research: studies of the impact of experience and related factors on the accuracy of decision-making; studies of the organization of expert knowledge; and studies of radiologists' perceptual processes.Results and Conclusion. Interpreting evidence from these three paradigms in the light of recent research into perceptual learning and studies of the visual pathway has a number of conclusions for the training of radiologists, particularly for the design of computer-based learning programs that are able to illustrate the similarities and differences between diagnoses, to give access to large numbers of cases and to help identify weaknesses in the way trainees build up a global representation from fixated regions
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