Encoding Robust Representation for Graph Generation

Generative networks have made it possible to generate meaningful signals such as images and texts from simple noise. Recently, generative methods based on GAN and VAE were developed for graphs and graph signals. However, the mathematical properties of these methods are unclear, and training good generative models is difficult. This work proposes a graph generation model that uses a recent adaptation of Mallat's scattering transform to graphs. The proposed model is naturally composed of an encoder and a decoder. The encoder is a Gaussianized graph scattering transform, which is robust to signal and graph manipulation. The decoder is a simple fully connected network that is adapted to specific tasks, such as link prediction, signal generation on graphs and full graph and signal generation. The training of our proposed system is efficient since it is only applied to the decoder and the hardware requirements are moderate. Numerical results demonstrate state-of-the-art performance of the proposed system for both link prediction and graph and signal generation.Comment: 9 pages, 7 figures, 6 table

Functional Connectome of the Human Brain with Total Correlation

Recent studies proposed the use of Total Correlation to describe functional connectivity among brain regions as a multivariate alternative to conventional pairwise measures such as correlation or mutual information. In this work, we build on this idea to infer a large-scale (whole-brain) connectivity network based on Total Correlation and show the possibility of using this kind of network as biomarkers of brain alterations. In particular, this work uses Correlation Explanation (CorEx) to estimate Total Correlation. First, we prove that CorEx estimates of Total Correlation and clustering results are trustable compared to ground truth values. Second, the inferred large-scale connectivity network extracted from the more extensive open fMRI datasets is consistent with existing neuroscience studies, but, interestingly, can estimate additional relations beyond pairwise regions. And finally, we show how the connectivity graphs based on Total Correlation can also be an effective tool to aid in the discovery of brain diseases

Multi-scale approaches for the statistical analysis of microarray data (with an application to 3D vesicle tracking)

The recent developments in experimental methods for gene data analysis, called microarrays, provide the possibility of interrogating changes in the expression of a vast number of genes in cell or tissue cultures and thus in depth exploration of disease conditions. As part of an ongoing program of research in Guy A. Rutter (G.A.R.) laboratory, Department of Biochemistry, University of Bristol, UK, with support from the Welcome Trust, we study the impact of established and of potentially new methods to the statistical analysis of gene expression data.EThOS - Electronic Theses Online ServiceGBUnited Kingdo