Theoretically Efficient Parallel Graph Algorithms Can Be Fast and Scalable

There has been significant recent interest in parallel graph processing due to the need to quickly analyze the large graphs available today. Many graph codes have been designed for distributed memory or external memory. However, today even the largest publicly-available real-world graph (the Hyperlink Web graph with over 3.5 billion vertices and 128 billion edges) can fit in the memory of a single commodity multicore server. Nevertheless, most experimental work in the literature report results on much smaller graphs, and the ones for the Hyperlink graph use distributed or external memory. Therefore, it is natural to ask whether we can efficiently solve a broad class of graph problems on this graph in memory. This paper shows that theoretically-efficient parallel graph algorithms can scale to the largest publicly-available graphs using a single machine with a terabyte of RAM, processing them in minutes. We give implementations of theoretically-efficient parallel algorithms for 20 important graph problems. We also present the optimizations and techniques that we used in our implementations, which were crucial in enabling us to process these large graphs quickly. We show that the running times of our implementations outperform existing state-of-the-art implementations on the largest real-world graphs. For many of the problems that we consider, this is the first time they have been solved on graphs at this scale. We have made the implementations developed in this work publicly-available as the Graph-Based Benchmark Suite (GBBS).Comment: This is the full version of the paper appearing in the ACM Symposium on Parallelism in Algorithms and Architectures (SPAA), 201

The Walk Distances in Graphs

The walk distances in graphs are defined as the result of appropriate transformations of the $\sum_{k=0}^\infty(tA)^k$ proximity measures, where $A$ is the weighted adjacency matrix of a graph and $t$ is a sufficiently small positive parameter. The walk distances are graph-geodetic; moreover, they converge to the shortest path distance and to the so-called long walk distance as the parameter $t$ approaches its limiting values. We also show that the logarithmic forest distances which are known to generalize the resistance distance and the shortest path distance are a subclass of walk distances. On the other hand, the long walk distance is equal to the resistance distance in a transformed graph.Comment: Accepted for publication in Discrete Applied Mathematics. 26 pages, 3 figure

Applications of Graphical Condensation for Enumerating Matchings and Tilings

A technique called graphical condensation is used to prove various combinatorial identities among numbers of (perfect) matchings of planar bipartite graphs and tilings of regions. Graphical condensation involves superimposing matchings of a graph onto matchings of a smaller subgraph, and then re-partitioning the united matching (actually a multigraph) into matchings of two other subgraphs, in one of two possible ways. This technique can be used to enumerate perfect matchings of a wide variety of bipartite planar graphs. Applications include domino tilings of Aztec diamonds and rectangles, diabolo tilings of fortresses, plane partitions, and transpose complement plane partitions.Comment: 25 pages; 21 figures Corrected typos; Updated references; Some text revised, but content essentially the sam

Better Tradeoffs for Exact Distance Oracles in Planar Graphs

We present an $O(n^{1.5})$-space distance oracle for directed planar graphs that answers distance queries in $O(\log n)$ time. Our oracle both significantly simplifies and significantly improves the recent oracle of Cohen-Addad, Dahlgaard and Wulff-Nilsen [FOCS 2017], which uses $O(n^{5/3})$-space and answers queries in $O(\log n)$ time. We achieve this by designing an elegant and efficient point location data structure for Voronoi diagrams on planar graphs. We further show a smooth tradeoff between space and query-time. For any $S\in [n,n^2]$, we show an oracle of size $S$ that answers queries in $\tilde O(\max\{1,n^{1.5}/S\})$ time. This new tradeoff is currently the best (up to polylogarithmic factors) for the entire range of $S$ and improves by polynomial factors over all the previously known tradeoffs for the range $S \in [n,n^{5/3}]$

Structure of Triadic Relations in Multiplex Networks

Recent advances in the study of networked systems have highlighted that our interconnected world is composed of networks that are coupled to each other through different "layers" that each represent one of many possible subsystems or types of interactions. Nevertheless, it is traditional to aggregate multilayer networks into a single weighted network in order to take advantage of existing tools. This is admittedly convenient, but it is also extremely problematic, as important information can be lost as a result. It is therefore important to develop multilayer generalizations of network concepts. In this paper, we analyze triadic relations and generalize the idea of transitivity to multiplex networks. By focusing on triadic relations, which yield the simplest type of transitivity, we generalize the concept and computation of clustering coefficients to multiplex networks. We show how the layered structure of such networks introduces a new degree of freedom that has a fundamental effect on transitivity. We compute multiplex clustering coefficients for several real multiplex networks and illustrate why one must take great care when generalizing standard network concepts to multiplex networks. We also derive analytical expressions for our clustering coefficients for ensemble averages of networks in a family of random multiplex networks. Our analysis illustrates that social networks have a strong tendency to promote redundancy by closing triads at every layer and that they thereby have a different type of multiplex transitivity from transportation networks, which do not exhibit such a tendency. These insights are invisible if one only studies aggregated networks.Comment: Main text + Supplementary Material included in a single file. Published in New Journal of Physic

Heavy cycles in k-connected weighted graphs with large weighted degree sums

2008-2009 > Academic research: refereed > Publication in refereed journalAccepted ManuscriptPublishe

A Parallel Solver for Graph Laplacians

Problems from graph drawing, spectral clustering, network flow and graph partitioning can all be expressed in terms of graph Laplacian matrices. There are a variety of practical approaches to solving these problems in serial. However, as problem sizes increase and single core speeds stagnate, parallelism is essential to solve such problems quickly. We present an unsmoothed aggregation multigrid method for solving graph Laplacians in a distributed memory setting. We introduce new parallel aggregation and low degree elimination algorithms targeted specifically at irregular degree graphs. These algorithms are expressed in terms of sparse matrix-vector products using generalized sum and product operations. This formulation is amenable to linear algebra using arbitrary distributions and allows us to operate on a 2D sparse matrix distribution, which is necessary for parallel scalability. Our solver outperforms the natural parallel extension of the current state of the art in an algorithmic comparison. We demonstrate scalability to 576 processes and graphs with up to 1.7 billion edges.Comment: PASC '18, Code: https://github.com/ligmg/ligm