Review: Object vision in a structured world

In natural vision, objects appear at typical locations, both with respect to visual space (e.g., an airplane in the upper part of a scene) and other objects (e.g., a lamp above a table). Recent studies have shown that object vision is strongly adapted to such positional regularities. In this review we synthesize these developments, highlighting that adaptations to positional regularities facilitate object detection and recognition, and sharpen the representations of objects in visual cortex. These effects are pervasive across various types of high-level content. We posit that adaptations to real-world structure collectively support optimal usage of limited cortical processing resources. Taking positional regularities into account will thus be essential for understanding efficient object vision in the real world

Pattern classification of valence in depression

Copyright @ The authors, 2013. This is an open access article available under Creative Commons Licence, CC-BY-NC-ND 3.0.Neuroimaging biomarkers of depression have potential to aid diagnosis, identify individuals at risk and predict treatment response or course of illness. Nevertheless none have been identified so far, potentially because no single brain parameter captures the complexity of the pathophysiology of depression. Multi-voxel pattern analysis (MVPA) may overcome this issue as it can identify patterns of voxels that are spatially distributed across the brain. Here we present the results of an MVPA to investigate the neuronal patterns underlying passive viewing of positive, negative and neutral pictures in depressed patients. A linear support vector machine (SVM) was trained to discriminate different valence conditions based on the functional magnetic resonance imaging (fMRI) data of nine unipolar depressed patients. A similar dataset obtained in nine healthy individuals was included to conduct a group classification analysis via linear discriminant analysis (LDA). Accuracy scores of 86% or higher were obtained for each valence contrast via patterns that included limbic areas such as the amygdala and frontal areas such as the ventrolateral prefrontal cortex. The LDA identified two areas (the dorsomedial prefrontal cortex and caudate nucleus) that allowed group classification with 72.2% accuracy. Our preliminary findings suggest that MVPA can identify stable valence patterns, with more sensitivity than univariate analysis, in depressed participants and that it may be possible to discriminate between healthy and depressed individuals based on differences in the brain's response to emotional cues.This work was supported by a PhD studentship to I.H. from the National Institute for Social Care and Health Research (NISCHR) HS/10/25 and MRC grant G 1100629

State Dependence of Stimulus-Induced Variability Tuning in Macaque MT

Behavioral states marked by varying levels of arousal and attention modulate some properties of cortical responses (e.g. average firing rates or pairwise correlations), yet it is not fully understood what drives these response changes and how they might affect downstream stimulus decoding. Here we show that changes in state modulate the tuning of response variance-to-mean ratios (Fano factors) in a fashion that is neither predicted by a Poisson spiking model nor changes in the mean firing rate, with a substantial effect on stimulus discriminability. We recorded motion-sensitive neurons in middle temporal cortex (MT) in two states: alert fixation and light, opioid anesthesia. Anesthesia tended to lower average spike counts, without decreasing trial-to-trial variability compared to the alert state. Under anesthesia, within-trial fluctuations in excitability were correlated over longer time scales compared to the alert state, creating supra-Poisson Fano factors. In contrast, alert-state MT neurons have higher mean firing rates and largely sub-Poisson variability that is stimulus-dependent and cannot be explained by firing rate differences alone. The absence of such stimulus-induced variability tuning in the anesthetized state suggests different sources of variability between states. A simple model explains state-dependent shifts in the distribution of observed Fano factors via a suppression in the variance of gain fluctuations in the alert state. A population model with stimulus-induced variability tuning and behaviorally constrained information-limiting correlations explores the potential enhancement in stimulus discriminability by the cortical population in the alert state.Comment: 36 pages, 18 figure

Decoding Motor Imagery from the Posterior Parietal Cortex of a Tetraplegic Human

Nonhuman primate and human studies have suggested that populations of neurons in the posterior parietal cortex (PPC) may represent high-level aspects of action planning that can be used to control external devices as part of a brain-machine interface. However, there is no direct neuron-recording evidence that human PPC is involved in action planning, and the suitability of these signals for neuroprosthetic control has not been tested.We recorded neural population activity with arrays of microelectrodes implanted in the PPC of a tetraplegic subject. Motor imagery could be decoded from these neural populations, including imagined goals, trajectories, and types of movement.These findings indicate that the PPC of humans represents high-level, cognitive aspects of action and that the PPC can be a rich source for cognitive control signals for neural prosthetics that assist paralyzed patients

Correlated Activity and Corticothalamic Cell Function in the Early Mouse Visual System

Vision has long been the model for understanding cortical function. Great progress has been made in understanding the transformations that occur within some primary visual cortex (V1) layers, like the emergence of orientation selectivity in layer 4. Less is known about other V1 circuit elements, like the shaping of V1 input via corticothalamic projections, or the population structure of the cortico-cortical output in layer 2/3. Here, we use the mouse early visual system to investigate the structure and function of circuit elements in V1. We use two approaches: comparative physiology and optogenetics. We measured the structure of pairwise correlations in the output layer 2/3 using extracellular recordings. We find that despite a lack of organization in mouse V1 seen in other species, the specificity of connections preserves a correlation structure on multiple timescales. To investigate the role of corticogeniculate projections, we utilize a transgenic mouse line to specifically and reversibly manipulate these projections with millisecond precision. We find that activity of these cells results a mix of inhibition and excitation in the thalamus, is not spatiotemporally specific, and can affect correlated activity. Finally, we classify mouse thalamic cells according to stimuli used for cell classification in primates and cats, finding some, but not complete, homology to the processing streams of primate thalamus and further highlighting fundamentals of mammalian visual system organization

Integrating Cortical Sensorimotor Representations Across Spatial Scales and Task Contexts

Our understanding of how brains function is stratified between two very different scales: mesoscale (what function a given cortical area performs), measured with tools like fMRI; and microscale (what a given neuron does), measured with implanted microelectrodes. While extensive research has been done to characterize brain activity at both of these spatial scales, describing relationships between these two domains has proven difficult. Identifying ways to integrate findings between these scales is valuable for both research and clinical applications, but is particularly important for intracortical brain-computer interfaces (BCIs), which aim to restore motor function after paralysis or amputation. In humans, the brain is much larger than the available microelectrode arrays, so determining where to place the arrays is a critical aspect of ensuring optimal performance. BCIs preferentially target primary motor and somatosensory cortices, due to their direct relationship to motor control and critical role in skilled and dexterous movements. However, despite these areas displaying a relatively ordered spatial organization, it is difficult to accurately predict the behavior of neurons recorded from a given area for several reasons. Mesoscale activity is overlapping, with activity relating to multiple different movements observed in a single area. Additionally, neurons have flexible behavior, displaying different “tuning” to similar behavior under different contexts. Here I present my research integrating neuroimaging-based cortical mapping with directly-recorded neural activity in human sensorimotor cortex. First, I examine how the large-scale organization of sensorimotor representations measured with fMRI is affected by contextual sensory information. I then examine how spatially separate neural populations recorded with intracortical microelectrode arrays encode different types of movement. Finally, I examine whether how population encoding changes to reflect contextual sensory information using the same task as in the fMRI study. Together, these results provide a foundation for reconciling neural activity across spatial scales and task contexts, and will inform the design and placement of more capable BCI systems

Functional Organization of the Human Brain: How We See, Feel, and Decide.

The human brain is responsible for constructing how we perceive, think, and act in the world around us. The organization of these functions is intricately distributed throughout the brain. Here, I discuss how functional magnetic resonance imaging (fMRI) was employed to understand three broad questions: how do we see, feel, and decide? First, high-resolution fMRI was used to measure the polar angle representation of saccadic eye movements in the superior colliculus. We found that eye movements along the superior-inferior visual field are mapped across the medial-lateral anatomy of a subcortical midbrain structure, the superior colliculus (SC). This result is consistent with the topography in monkey SC. Second, we measured the empathic responses of the brain as people watched a hand get painfully stabbed with a needle. We found that if the hand was labeled as belonging to the same religion as the observer, the empathic neural response was heightened, creating a strong ingroup bias that could not be readily manipulated. Third, we measured brain activity in individuals as they made free decisions (i.e., choosing randomly which of two buttons to press) and found the activity within fronto-thalamic networks to be significantly decreased compared to being instructed (forced) to press a particular button. I also summarize findings from several other projects ranging from addiction therapies to decoding visual imagination to how corporations are represented as people. Together, these approaches illustrate how functional neuroimaging can be used to understand the organization of the human brain