Enhancing feature selection with a novel hybrid approach incorporating genetic algorithms and swarm intelligence techniques

Computing advances in data storage are leading to rapid growth in large-scale datasets. Using all features increases temporal/spatial complexity and negatively influences performance. Feature selection is a fundamental stage in data preprocessing, removing redundant and irrelevant features to minimize the number of features and enhance the performance of classification accuracy. Numerous optimization algorithms were employed to handle feature selection (FS) problems, and they outperform conventional FS techniques. However, there is no metaheuristic FS method that outperforms other optimization algorithms in many datasets. This motivated our study to incorporate the advantages of various optimization techniques to obtain a powerful technique that outperforms other methods in many datasets from different domains. In this article, a novel combined method GASI is developed using swarm intelligence (SI) based feature selection techniques and genetic algorithms (GA) that uses a multi-objective fitness function to seek the optimal subset of features. To assess the performance of the proposed approach, seven datasets have been collected from the UCI repository and exploited to test the newly established feature selection technique. The experimental results demonstrate that the suggested method GASI outperforms many powerful SI-based feature selection techniques studied. GASI obtains a better average fitness value and improves classification performance

Hybrid ACO and SVM algorithm for pattern classification

Ant Colony Optimization (ACO) is a metaheuristic algorithm that can be used to solve a variety of combinatorial optimization problems. A new direction for ACO is to optimize continuous and mixed (discrete and continuous) variables. Support Vector Machine (SVM) is a pattern classification approach originated from statistical approaches. However, SVM suffers two main problems which include feature subset selection and parameter tuning. Most approaches related to tuning SVM parameters discretize the continuous value of the parameters which will give a negative effect on the classification performance. This study presents four algorithms for tuning the SVM parameters and selecting feature subset which improved SVM classification accuracy with smaller size of feature subset. This is achieved by performing the SVM parameters’ tuning and feature subset selection processes simultaneously. Hybridization algorithms between ACO and SVM techniques were proposed. The first two algorithms, ACOR-SVM and IACOR-SVM, tune the SVM parameters while the second two algorithms, ACOMV-R-SVM and IACOMV-R-SVM, tune the SVM parameters and select the feature subset simultaneously. Ten benchmark datasets from University of California, Irvine, were used in the experiments to validate the performance of the proposed algorithms. Experimental results obtained from the proposed algorithms are better when compared with other approaches in terms of classification accuracy and size of the feature subset. The average classification accuracies for the ACOR-SVM, IACOR-SVM, ACOMV-R and IACOMV-R algorithms are 94.73%, 95.86%, 97.37% and 98.1% respectively. The average size of feature subset is eight for the ACOR-SVM and IACOR-SVM algorithms and four for the ACOMV-R and IACOMV-R algorithms. This study contributes to a new direction for ACO that can deal with continuous and mixed-variable ACO

Hybrid feature selection of breast cancer gene expression microarray data based on metaheuristic methods: a comprehensive review

Breast cancer (BC) remains the most dominant cancer among women worldwide. Numerous BC gene expression microarray-based studies have been employed in cancer classification and prognosis. The availability of gene expression microarray data together with advanced classification methods has enabled accurate and precise classification. Nevertheless, the microarray datasets suffer from a large number of gene expression levels, limited sample size, and irrelevant features. Additionally, datasets are often asymmetrical, where the number of samples from different classes is not balanced. These limitations make it difficult to determine the actual features that contribute to the existence of cancer classification in the gene expression profiles. Various accurate feature selection methods exist, and they are being widely applied. The objective of feature selection is to search for a relevant, discriminant feature subset from the basic feature space. In this review, we aim to compile and review the latest hybrid feature selection methods based on bio-inspired metaheuristic methods and wrapper methods for the classification of BC and other types of cancer

Swarm Intelligence Based Feature Selection for High Dimensional Classification: A Literature Survey

Feature selection is an important and challenging task in machine learning and data mining techniques to avoid the curse of dimensionality and maximize the classification accuracy. Moreover, feature selection helps to reduce computational complexity of learning algorithm, improve prediction performance, better data understanding and reduce data storage space. Swarm intelligence based feature selection approach enables to find an optimal feature subset from an extremely large dimensionality of features for building the most accurate classifier model. There is still a type of researches that is not done yet in data mining. In this paper, the utilization of swarm intelligence algorithms for feature selection process in high dimensional data focusing on medical data classification is form the subject matter. The results shows that swarm intelligence algorithms reviewed based on state-of-the-art literature have a promising capability that can be applied in feature selections techniques. The significance of this work is to present the comparison and various alternatives of swarm algorithms to be applied in feature selections for high dimensional classification

Evolutionary Computation and QSAR Research

[Abstract] The successful high throughput screening of molecule libraries for a specific biological property is one of the main improvements in drug discovery. The virtual molecular filtering and screening relies greatly on quantitative structure-activity relationship (QSAR) analysis, a mathematical model that correlates the activity of a molecule with molecular descriptors. QSAR models have the potential to reduce the costly failure of drug candidates in advanced (clinical) stages by filtering combinatorial libraries, eliminating candidates with a predicted toxic effect and poor pharmacokinetic profiles, and reducing the number of experiments. To obtain a predictive and reliable QSAR model, scientists use methods from various fields such as molecular modeling, pattern recognition, machine learning or artificial intelligence. QSAR modeling relies on three main steps: molecular structure codification into molecular descriptors, selection of relevant variables in the context of the analyzed activity, and search of the optimal mathematical model that correlates the molecular descriptors with a specific activity. Since a variety of techniques from statistics and artificial intelligence can aid variable selection and model building steps, this review focuses on the evolutionary computation methods supporting these tasks. Thus, this review explains the basic of the genetic algorithms and genetic programming as evolutionary computation approaches, the selection methods for high-dimensional data in QSAR, the methods to build QSAR models, the current evolutionary feature selection methods and applications in QSAR and the future trend on the joint or multi-task feature selection methods.Instituto de Salud Carlos III, PIO52048Instituto de Salud Carlos III, RD07/0067/0005Ministerio de Industria, Comercio y Turismo; TSI-020110-2009-53)Galicia. Consellería de Economía e Industria; 10SIN105004P