9,171 research outputs found
To Learn or Not to Learn Features for Deformable Registration?
Feature-based registration has been popular with a variety of features
ranging from voxel intensity to Self-Similarity Context (SSC). In this paper,
we examine the question on how features learnt using various Deep Learning (DL)
frameworks can be used for deformable registration and whether this feature
learning is necessary or not. We investigate the use of features learned by
different DL methods in the current state-of-the-art discrete registration
framework and analyze its performance on 2 publicly available datasets. We draw
insights into the type of DL framework useful for feature learning and the
impact, if any, of the complexity of different DL models and brain parcellation
methods on the performance of discrete registration. Our results indicate that
the registration performance with DL features and SSC are comparable and stable
across datasets whereas this does not hold for low level features.Comment: 9 pages, 4 figure
Determining candidate polyp morphology from CT colonography using a level-set method
In this paper we propose a level-set segmentation for
polyp candidates in Computer Tomography Colongraphy
(CTC). Correct classification of the candidate
polyps into polyp and non-polyp is, in most cases,
evaluated using shape features. Therefore, accurate
recovery of the polyp candidate surface is important
for correct classification. The method presented in
this paper, evolves a curvature and gradient dependent
boundary to recover the surface of the polyp candidate
in a level-set framework. The curvature term
is computed using a combination of the Mean curvature
and the Gaussian curvature. The results of
the algorithm were run through a classifier for two
complete data-sets and returned 100% sensitivity for
polyps greater than 5mm
Computerized Analysis of Magnetic Resonance Images to Study Cerebral Anatomy in Developing Neonates
The study of cerebral anatomy in developing neonates is of great importance for
the understanding of brain development during the early period of life. This
dissertation therefore focuses on three challenges in the modelling of cerebral
anatomy in neonates during brain development. The methods that have been
developed all use Magnetic Resonance Images (MRI) as source data.
To facilitate study of vascular development in the neonatal period, a set of image
analysis algorithms are developed to automatically extract and model cerebral
vessel trees. The whole process consists of cerebral vessel tracking from
automatically placed seed points, vessel tree generation, and vasculature
registration and matching. These algorithms have been tested on clinical Time-of-
Flight (TOF) MR angiographic datasets.
To facilitate study of the neonatal cortex a complete cerebral cortex segmentation
and reconstruction pipeline has been developed. Segmentation of the neonatal
cortex is not effectively done by existing algorithms designed for the adult brain
because the contrast between grey and white matter is reversed. This causes pixels
containing tissue mixtures to be incorrectly labelled by conventional methods. The
neonatal cortical segmentation method that has been developed is based on a novel
expectation-maximization (EM) method with explicit correction for mislabelled
partial volume voxels. Based on the resulting cortical segmentation, an implicit
surface evolution technique is adopted for the reconstruction of the cortex in
neonates. The performance of the method is investigated by performing a detailed
landmark study.
To facilitate study of cortical development, a cortical surface registration algorithm
for aligning the cortical surface is developed. The method first inflates extracted
cortical surfaces and then performs a non-rigid surface registration using free-form
deformations (FFDs) to remove residual alignment. Validation experiments using
data labelled by an expert observer demonstrate that the method can capture local
changes and follow the growth of specific sulcus
Left-ventricle myocardium segmentation using a coupled level-set with a priori knowledge
This paper presents a coupled level-set segmentation of the myocardium of the left ventricle of the heart using a priori information. From a fast marching initialisation, two fronts representing the endocardium and epicardium boundaries of the left ventricle are evolved as the zero level-set of a higher dimension function. We introduce a novel and robust stopping term using both gradient and region-based information. The segmentation is supervised both with a coupling function and using a probabilistic model built from training instances. The robustness of the segmentation scheme is evaluated by performing a segmentation on four unseen data-sets containing high variation and the performance of the segmentation is quantitatively assessed
Receptive Field Block Net for Accurate and Fast Object Detection
Current top-performing object detectors depend on deep CNN backbones, such as
ResNet-101 and Inception, benefiting from their powerful feature
representations but suffering from high computational costs. Conversely, some
lightweight model based detectors fulfil real time processing, while their
accuracies are often criticized. In this paper, we explore an alternative to
build a fast and accurate detector by strengthening lightweight features using
a hand-crafted mechanism. Inspired by the structure of Receptive Fields (RFs)
in human visual systems, we propose a novel RF Block (RFB) module, which takes
the relationship between the size and eccentricity of RFs into account, to
enhance the feature discriminability and robustness. We further assemble RFB to
the top of SSD, constructing the RFB Net detector. To evaluate its
effectiveness, experiments are conducted on two major benchmarks and the
results show that RFB Net is able to reach the performance of advanced very
deep detectors while keeping the real-time speed. Code is available at
https://github.com/ruinmessi/RFBNet.Comment: Accepted by ECCV 201
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