Content Differences in Syntactic and Semantic Representations

Syntactic analysis plays an important role in semantic parsing, but the nature of this role remains a topic of ongoing debate. The debate has been constrained by the scarcity of empirical comparative studies between syntactic and semantic schemes, which hinders the development of parsing methods informed by the details of target schemes and constructions. We target this gap, and take Universal Dependencies (UD) and UCCA as a test case. After abstracting away from differences of convention or formalism, we find that most content divergences can be ascribed to: (1) UCCA's distinction between a Scene and a non-Scene; (2) UCCA's distinction between primary relations, secondary ones and participants; (3) different treatment of multi-word expressions, and (4) different treatment of inter-clause linkage. We further discuss the long tail of cases where the two schemes take markedly different approaches. Finally, we show that the proposed comparison methodology can be used for fine-grained evaluation of UCCA parsing, highlighting both challenges and potential sources for improvement. The substantial differences between the schemes suggest that semantic parsers are likely to benefit downstream text understanding applications beyond their syntactic counterparts.Comment: NAACL-HLT 2019 camera read

Deep learning for extracting protein-protein interactions from biomedical literature

State-of-the-art methods for protein-protein interaction (PPI) extraction are primarily feature-based or kernel-based by leveraging lexical and syntactic information. But how to incorporate such knowledge in the recent deep learning methods remains an open question. In this paper, we propose a multichannel dependency-based convolutional neural network model (McDepCNN). It applies one channel to the embedding vector of each word in the sentence, and another channel to the embedding vector of the head of the corresponding word. Therefore, the model can use richer information obtained from different channels. Experiments on two public benchmarking datasets, AIMed and BioInfer, demonstrate that McDepCNN compares favorably to the state-of-the-art rich-feature and single-kernel based methods. In addition, McDepCNN achieves 24.4% relative improvement in F1-score over the state-of-the-art methods on cross-corpus evaluation and 12% improvement in F1-score over kernel-based methods on "difficult" instances. These results suggest that McDepCNN generalizes more easily over different corpora, and is capable of capturing long distance features in the sentences.Comment: Accepted for publication in Proceedings of the 2017 Workshop on Biomedical Natural Language Processing, 10 pages, 2 figures, 6 table

Depicting urban boundaries from a mobility network of spatial interactions: A case study of Great Britain with geo-located Twitter data

Existing urban boundaries are usually defined by government agencies for administrative, economic, and political purposes. Defining urban boundaries that consider socio-economic relationships and citizen commute patterns is important for many aspects of urban and regional planning. In this paper, we describe a method to delineate urban boundaries based upon human interactions with physical space inferred from social media. Specifically, we depicted the urban boundaries of Great Britain using a mobility network of Twitter user spatial interactions, which was inferred from over 69 million geo-located tweets. We define the non-administrative anthropographic boundaries in a hierarchical fashion based on different physical movement ranges of users derived from the collective mobility patterns of Twitter users in Great Britain. The results of strongly connected urban regions in the form of communities in the network space yield geographically cohesive, non-overlapping urban areas, which provide a clear delineation of the non-administrative anthropographic urban boundaries of Great Britain. The method was applied to both national (Great Britain) and municipal scales (the London metropolis). While our results corresponded well with the administrative boundaries, many unexpected and interesting boundaries were identified. Importantly, as the depicted urban boundaries exhibited a strong instance of spatial proximity, we employed a gravity model to understand the distance decay effects in shaping the delineated urban boundaries. The model explains how geographical distances found in the mobility patterns affect the interaction intensity among different non-administrative anthropographic urban areas, which provides new insights into human spatial interactions with urban space.Comment: 32 pages, 7 figures, International Journal of Geographic Information Scienc

A Survey of Location Prediction on Twitter

Locations, e.g., countries, states, cities, and point-of-interests, are central to news, emergency events, and people's daily lives. Automatic identification of locations associated with or mentioned in documents has been explored for decades. As one of the most popular online social network platforms, Twitter has attracted a large number of users who send millions of tweets on daily basis. Due to the world-wide coverage of its users and real-time freshness of tweets, location prediction on Twitter has gained significant attention in recent years. Research efforts are spent on dealing with new challenges and opportunities brought by the noisy, short, and context-rich nature of tweets. In this survey, we aim at offering an overall picture of location prediction on Twitter. Specifically, we concentrate on the prediction of user home locations, tweet locations, and mentioned locations. We first define the three tasks and review the evaluation metrics. By summarizing Twitter network, tweet content, and tweet context as potential inputs, we then structurally highlight how the problems depend on these inputs. Each dependency is illustrated by a comprehensive review of the corresponding strategies adopted in state-of-the-art approaches. In addition, we also briefly review two related problems, i.e., semantic location prediction and point-of-interest recommendation. Finally, we list future research directions.Comment: Accepted to TKDE. 30 pages, 1 figur

SE-KGE: A Location-Aware Knowledge Graph Embedding Model for Geographic Question Answering and Spatial Semantic Lifting

Learning knowledge graph (KG) embeddings is an emerging technique for a variety of downstream tasks such as summarization, link prediction, information retrieval, and question answering. However, most existing KG embedding models neglect space and, therefore, do not perform well when applied to (geo)spatial data and tasks. For those models that consider space, most of them primarily rely on some notions of distance. These models suffer from higher computational complexity during training while still losing information beyond the relative distance between entities. In this work, we propose a location-aware KG embedding model called SE-KGE. It directly encodes spatial information such as point coordinates or bounding boxes of geographic entities into the KG embedding space. The resulting model is capable of handling different types of spatial reasoning. We also construct a geographic knowledge graph as well as a set of geographic query-answer pairs called DBGeo to evaluate the performance of SE-KGE in comparison to multiple baselines. Evaluation results show that SE-KGE outperforms these baselines on the DBGeo dataset for geographic logic query answering task. This demonstrates the effectiveness of our spatially-explicit model and the importance of considering the scale of different geographic entities. Finally, we introduce a novel downstream task called spatial semantic lifting which links an arbitrary location in the study area to entities in the KG via some relations. Evaluation on DBGeo shows that our model outperforms the baseline by a substantial margin.Comment: Accepted to Transactions in GI