3,205 research outputs found
Advances in Learning Bayesian Networks of Bounded Treewidth
This work presents novel algorithms for learning Bayesian network structures
with bounded treewidth. Both exact and approximate methods are developed. The
exact method combines mixed-integer linear programming formulations for
structure learning and treewidth computation. The approximate method consists
in uniformly sampling -trees (maximal graphs of treewidth ), and
subsequently selecting, exactly or approximately, the best structure whose
moral graph is a subgraph of that -tree. Some properties of these methods
are discussed and proven. The approaches are empirically compared to each other
and to a state-of-the-art method for learning bounded treewidth structures on a
collection of public data sets with up to 100 variables. The experiments show
that our exact algorithm outperforms the state of the art, and that the
approximate approach is fairly accurate.Comment: 23 pages, 2 figures, 3 table
Diameter and Treewidth in Minor-Closed Graph Families
It is known that any planar graph with diameter D has treewidth O(D), and
this fact has been used as the basis for several planar graph algorithms. We
investigate the extent to which similar relations hold in other graph families.
We show that treewidth is bounded by a function of the diameter in a
minor-closed family, if and only if some apex graph does not belong to the
family. In particular, the O(D) bound above can be extended to bounded-genus
graphs. As a consequence, we extend several approximation algorithms and exact
subgraph isomorphism algorithms from planar graphs to other graph families.Comment: 15 pages, 12 figure
A Solution Merging Heuristic for the Steiner Problem in Graphs Using Tree Decompositions
Fixed parameter tractable algorithms for bounded treewidth are known to exist
for a wide class of graph optimization problems. While most research in this
area has been focused on exact algorithms, it is hard to find decompositions of
treewidth sufficiently small to make these al- gorithms fast enough for
practical use. Consequently, tree decomposition based algorithms have limited
applicability to large scale optimization. However, by first reducing the input
graph so that a small width tree decomposition can be found, we can harness the
power of tree decomposi- tion based techniques in a heuristic algorithm, usable
on graphs of much larger treewidth than would be tractable to solve exactly. We
propose a solution merging heuristic to the Steiner Tree Problem that applies
this idea. Standard local search heuristics provide a natural way to generate
subgraphs with lower treewidth than the original instance, and subse- quently
we extract an improved solution by solving the instance induced by this
subgraph. As such the fixed parameter tractable algorithm be- comes an
efficient tool for our solution merging heuristic. For a large class of sparse
benchmark instances the algorithm is able to find small width tree
decompositions on the union of generated solutions. Subsequently it can often
improve on the generated solutions fast
Parameterized Approximation Schemes using Graph Widths
Combining the techniques of approximation algorithms and parameterized
complexity has long been considered a promising research area, but relatively
few results are currently known. In this paper we study the parameterized
approximability of a number of problems which are known to be hard to solve
exactly when parameterized by treewidth or clique-width. Our main contribution
is to present a natural randomized rounding technique that extends well-known
ideas and can be used for both of these widths. Applying this very generic
technique we obtain approximation schemes for a number of problems, evading
both polynomial-time inapproximability and parameterized intractability bounds
Pre-processing for Triangulation of Probabilistic Networks
The currently most efficient algorithm for inference with a probabilistic
network builds upon a triangulation of a network's graph. In this paper, we
show that pre-processing can help in finding good triangulations
forprobabilistic networks, that is, triangulations with a minimal maximum
clique size. We provide a set of rules for stepwise reducing a graph, without
losing optimality. This reduction allows us to solve the triangulation problem
on a smaller graph. From the smaller graph's triangulation, a triangulation of
the original graph is obtained by reversing the reduction steps. Our
experimental results show that the graphs of some well-known real-life
probabilistic networks can be triangulated optimally just by preprocessing; for
other networks, huge reductions in their graph's size are obtained.Comment: Appears in Proceedings of the Seventeenth Conference on Uncertainty
in Artificial Intelligence (UAI2001
Large induced subgraphs via triangulations and CMSO
We obtain an algorithmic meta-theorem for the following optimization problem.
Let \phi\ be a Counting Monadic Second Order Logic (CMSO) formula and t be an
integer. For a given graph G, the task is to maximize |X| subject to the
following: there is a set of vertices F of G, containing X, such that the
subgraph G[F] induced by F is of treewidth at most t, and structure (G[F],X)
models \phi.
Some special cases of this optimization problem are the following generic
examples. Each of these cases contains various problems as a special subcase:
1) "Maximum induced subgraph with at most l copies of cycles of length 0
modulo m", where for fixed nonnegative integers m and l, the task is to find a
maximum induced subgraph of a given graph with at most l vertex-disjoint cycles
of length 0 modulo m.
2) "Minimum \Gamma-deletion", where for a fixed finite set of graphs \Gamma\
containing a planar graph, the task is to find a maximum induced subgraph of a
given graph containing no graph from \Gamma\ as a minor.
3) "Independent \Pi-packing", where for a fixed finite set of connected
graphs \Pi, the task is to find an induced subgraph G[F] of a given graph G
with the maximum number of connected components, such that each connected
component of G[F] is isomorphic to some graph from \Pi.
We give an algorithm solving the optimization problem on an n-vertex graph G
in time O(#pmc n^{t+4} f(t,\phi)), where #pmc is the number of all potential
maximal cliques in G and f is a function depending of t and \phi\ only. We also
show how a similar running time can be obtained for the weighted version of the
problem. Pipelined with known bounds on the number of potential maximal
cliques, we deduce that our optimization problem can be solved in time
O(1.7347^n) for arbitrary graphs, and in polynomial time for graph classes with
polynomial number of minimal separators
Solving Connectivity Problems Parameterized by Treedepth in Single-Exponential Time and Polynomial Space
A breakthrough result of Cygan et al. (FOCS 2011) showed that connectivity problems parameterized by treewidth can be solved much faster than the previously best known time ?^*(2^{?(twlog tw)}). Using their inspired Cut&Count technique, they obtained ?^*(?^tw) time algorithms for many such problems. Moreover, they proved these running times to be optimal assuming the Strong Exponential-Time Hypothesis. Unfortunately, like other dynamic programming algorithms on tree decompositions, these algorithms also require exponential space, and this is widely believed to be unavoidable. In contrast, for the slightly larger parameter called treedepth, there are already several examples of matching the time bounds obtained for treewidth, but using only polynomial space. Nevertheless, this has remained open for connectivity problems.
In the present work, we close this knowledge gap by applying the Cut&Count technique to graphs of small treedepth. While the general idea is unchanged, we have to design novel procedures for counting consistently cut solution candidates using only polynomial space. Concretely, we obtain time ?^*(3^d) and polynomial space for Connected Vertex Cover, Feedback Vertex Set, and Steiner Tree on graphs of treedepth d. Similarly, we obtain time ?^*(4^d) and polynomial space for Connected Dominating Set and Connected Odd Cycle Transversal
- …