WISER: A Semantic Approach for Expert Finding in Academia based on Entity Linking

We present WISER, a new semantic search engine for expert finding in academia. Our system is unsupervised and it jointly combines classical language modeling techniques, based on text evidences, with the Wikipedia Knowledge Graph, via entity linking. WISER indexes each academic author through a novel profiling technique which models her expertise with a small, labeled and weighted graph drawn from Wikipedia. Nodes in this graph are the Wikipedia entities mentioned in the author's publications, whereas the weighted edges express the semantic relatedness among these entities computed via textual and graph-based relatedness functions. Every node is also labeled with a relevance score which models the pertinence of the corresponding entity to author's expertise, and is computed by means of a proper random-walk calculation over that graph; and with a latent vector representation which is learned via entity and other kinds of structural embeddings derived from Wikipedia. At query time, experts are retrieved by combining classic document-centric approaches, which exploit the occurrences of query terms in the author's documents, with a novel set of profile-centric scoring strategies, which compute the semantic relatedness between the author's expertise and the query topic via the above graph-based profiles. The effectiveness of our system is established over a large-scale experimental test on a standard dataset for this task. We show that WISER achieves better performance than all the other competitors, thus proving the effectiveness of modelling author's profile via our "semantic" graph of entities. Finally, we comment on the use of WISER for indexing and profiling the whole research community within the University of Pisa, and its application to technology transfer in our University

Incorporating GAN for Negative Sampling in Knowledge Representation Learning

Knowledge representation learning aims at modeling knowledge graph by encoding entities and relations into a low dimensional space. Most of the traditional works for knowledge embedding need negative sampling to minimize a margin-based ranking loss. However, those works construct negative samples through a random mode, by which the samples are often too trivial to fit the model efficiently. In this paper, we propose a novel knowledge representation learning framework based on Generative Adversarial Networks (GAN). In this GAN-based framework, we take advantage of a generator to obtain high-quality negative samples. Meanwhile, the discriminator in GAN learns the embeddings of the entities and relations in knowledge graph. Thus, we can incorporate the proposed GAN-based framework into various traditional models to improve the ability of knowledge representation learning. Experimental results show that our proposed GAN-based framework outperforms baselines on triplets classification and link prediction tasks.Comment: Accepted to AAAI 201

Neighborhood Matching Network for Entity Alignment

Structural heterogeneity between knowledge graphs is an outstanding challenge for entity alignment. This paper presents Neighborhood Matching Network (NMN), a novel entity alignment framework for tackling the structural heterogeneity challenge. NMN estimates the similarities between entities to capture both the topological structure and the neighborhood difference. It provides two innovative components for better learning representations for entity alignment. It first uses a novel graph sampling method to distill a discriminative neighborhood for each entity. It then adopts a cross-graph neighborhood matching module to jointly encode the neighborhood difference for a given entity pair. Such strategies allow NMN to effectively construct matching-oriented entity representations while ignoring noisy neighbors that have a negative impact on the alignment task. Extensive experiments performed on three entity alignment datasets show that NMN can well estimate the neighborhood similarity in more tough cases and significantly outperforms 12 previous state-of-the-art methods.Comment: 11 pages, accepted by ACL 202

edge2vec: Representation learning using edge semantics for biomedical knowledge discovery

Representation learning provides new and powerful graph analytical approaches and tools for the highly valued data science challenge of mining knowledge graphs. Since previous graph analytical methods have mostly focused on homogeneous graphs, an important current challenge is extending this methodology for richly heterogeneous graphs and knowledge domains. The biomedical sciences are such a domain, reflecting the complexity of biology, with entities such as genes, proteins, drugs, diseases, and phenotypes, and relationships such as gene co-expression, biochemical regulation, and biomolecular inhibition or activation. Therefore, the semantics of edges and nodes are critical for representation learning and knowledge discovery in real world biomedical problems. In this paper, we propose the edge2vec model, which represents graphs considering edge semantics. An edge-type transition matrix is trained by an Expectation-Maximization approach, and a stochastic gradient descent model is employed to learn node embedding on a heterogeneous graph via the trained transition matrix. edge2vec is validated on three biomedical domain tasks: biomedical entity classification, compound-gene bioactivity prediction, and biomedical information retrieval. Results show that by considering edge-types into node embedding learning in heterogeneous graphs, \textbf{edge2vec}\ significantly outperforms state-of-the-art models on all three tasks. We propose this method for its added value relative to existing graph analytical methodology, and in the real world context of biomedical knowledge discovery applicability.Comment: 10 page