Preserving Useful Info While Reducing Noise of Physiological Signals by Using Wavelet Analysis

Wavelet analysis is a powerful mathematical tool commonly used in signal processing applications, such as image analysis, image compression, image edge detection, and communications systems. Unlike traditional Fourier analysis, wavelet analysis allows for multiple resolutions in the time and frequency domains; it can preserve time information while decomposing a signal spectrum over a range of frequencies. Wavelet analysis is also more suitable for detecting numerous transitory characteristics, such as drift, trends, abrupt changes, and beginnings and ends of events. These characteristics are often the most important and critical part of some non-stationary signals, such as physiological signals. The thesis focuses on a formal analysis of using wavelet transform for noise filtering. The performance of the wavelet analysis is simulated on a variety of patient samples of Arterial Blood Pressure (ABP 14 sets) and Electrocardiography (ECG 14 sets) from the Mayo Clinic at Jacksonville. The performance of the Fourier analysis is also simulated on the same patient samples for comparison purpose. Additive white Gaussian noise (AWGN) is generated and added to the samples for studying the AWGN effect on physiological signals and both analysis methods. The algorithms of finding the optimal level of approximation and calculating the threshold value of filtering are created and different ways of adding the details back to the approximation are studied. Wavelet analysis has the ability to add or remove certain frequency bands with threshold selectivity from the original signal. It can effectively preserve the spikes and humps, which are the information that is intended to be kept, while de-noising physiological signals. The simulation results show that the wavelet analysis has a better performance than Fourier analysis in preserving the transitory information of the physiological signals

An inclusive survey of contactless wireless sensing: a technology used for remotely monitoring vital signs has the potential to combating COVID-19

With the Coronavirus pandemic showing no signs of abating, companies and governments around the world are spending millions of dollars to develop contactless sensor technologies that minimize the need for physical interactions between the patient and healthcare providers. As a result, healthcare research studies are rapidly progressing towards discovering innovative contactless technologies, especially for infants and elderly people who are suffering from chronic diseases that require continuous, real-time control, and monitoring. The fusion between sensing technology and wireless communication has emerged as a strong research candidate choice because wearing sensor devices is not desirable by patients as they cause anxiety and discomfort. Furthermore, physical contact exacerbates the spread of contagious diseases which may lead to catastrophic consequences. For this reason, research has gone towards sensor-less or contactless technology, through sending wireless signals, then analyzing and processing the reflected signals using special techniques such as frequency modulated continuous wave (FMCW) or channel state information (CSI). Therefore, it becomes easy to monitor and measure the subject’s vital signs remotely without physical contact or asking them to wear sensor devices. In this paper, we overview and explore state-of-the-art research in the field of contactless sensor technology in medicine, where we explain, summarize, and classify a plethora of contactless sensor technologies and techniques with the highest impact on contactless healthcare. Moreover, we overview the enabling hardware technologies as well as discuss the main challenges faced by these systems.This work is funded by the scientific and technological research council of Turkey (TÜBITAK) under grand 119E39

A HARDWARE-SOFTWARE CO-DESIGNED WEARABLE FOR REAL-TIME PHYSIOLOGICAL DATA COLLECTION AND SIGNAL QUALITY ASSESSMENT

In the future, Smart and Connected Communities (S&CC) will use distributed wireless sensors and embedded computing platforms to produce meaningful data that can help individuals, and communities. Here, we presented a scanner, a data reliability estimation algorithm and Electrocardiogram (ECG) beat classification algorithm which contributes to the S&CC framework .In part 1, we report the design, prototyping, and functional validation of a low-power, small, and portable signal acquisition device for these sensors. The scanner was fully tested, characterized, and validated in the lab, as well as through deployment to users homes. As a test case, we show results of the scanner measuring WRAP temperature sensors with relative error within the 0.01% range. The scanner measurement shows distinguish temperature of 1F difference and excellent linear dependence between actual and measured resistance (R2 = 0.998). This device hasdemonstrated the possibility of a small, low-power portable scanner for WRAP sensors.Additionally, we explored the statistical data reliability metric (DReM) to explain the quality of bio-signal quantitatively on a scale between 0.0 -1.0. As proof of concept, we analyzed the ECG signal. Our DReM prediction algorithm measures the reliability of the ECG signals effectively with low Root mean square error = 0.010 and Mean absolute error = 0.008 and coefficient of determination R2 value of 0.990. Finally, we tested our model against the opinions of three independent judges and presented R2 value to determine the agreement between judgments vs our prediction model.We concluded our contribution to the S&CC framework by analyzing ECG beat classification with a pipeline of classifiers that focuses on improving the models performance on identifying minority classes (ventricular ectopic beat, supraventricular ectopic beat). Moreover, we intended to minimize morphological distortion introduced due to indiscriminate use of filtering techniques on ECG signals. Our approach shows an average positive predictive value 95.21%, sensitivity of95.28%, and F-1 score 95.76% respectively

Removal of artifacts from electrocardiogram

The electrocardiogram is the recording of the electrical potential of heart versus time. The analysis of ECG signal has great importance in the detection of cardiac abnormalities. The electrocardiographic signals are often contaminated by noise from diverse sources. Noises that commonly disturb the basic electrocardiogram are power line interference, instrumentation noise, external electromagnetic field interference, noise due to random body movements and respirational movements. These noises can be classified according to their frequency content. It is essential to reduce these disturbances in ECG signal to improve accuracy and reliability. Different types of adaptive and non-adaptive digital filters have been proposed to remove these noises. In this thesis, window based FIR filters, adaptive filters and wavelet filter bank are applied to remove the noises. Performances of the filters are compared based on the PSNR values. It is difficult to apply filters with fixed filter coefficients to reduce the instrumentation noise, because the time varying behaviour of this noise is not exactly known. Adaptive filter technique is required to overcome this problem, as the filter coefficients can be varied to track the dynamic variations of the signals. In wavelet transform, a signal is analyzed and expressed as a linear combination of the summation of the product of the wavelet coefficients and mother wavelet. The wavelet decomposition offers an excellent resolution both in time and frequency domain. Better estimation of the amplitudes is also obtained in wavelet based denoising

Optimisation of vibration monitoring nodes in wireless sensor networks

This PhD research focuses on developing a wireless vibration condition monitoring (CM) node which allows an optimal implementation of advanced signal processing algorithms. Obviously, such a node should meet additional yet practical requirements including high robustness and low investments in achieving predictive maintenance. There are a number of wireless protocols which can be utilised to establish a wireless sensor network (WSN). Protocols like WiFi HaLow, Bluetooth low energy (BLE), ZigBee and Thread are more suitable for long-term non-critical CM battery powered nodes as they provide inherent merits like low cost, self-organising network, and low power consumption. WirelessHART and ISA100.11a provide more reliable and robust performance but their solutions are usually more expensive, thus they are more suitable for strict industrial control applications. Distributed computation can utilise the limited bandwidth of wireless network and battery life of sensor nodes more wisely. Hence it is becoming increasingly popular in wireless CM with the fast development of electronics and wireless technologies in recent years. Therefore, distributed computation is the primary focus of this research in order to develop an advanced sensor node for realising wireless networks which allow high-performance CM at minimal network traffic and economic cost. On this basis, a ZigBee-based vibration monitoring node is designed for the evaluation of embedding signal processing algorithms. A state-of-the-art Cortex-M4F processor is employed as the core processor on the wireless sensor node, which has been optimised for implementing complex signal processing algorithms at low power consumption. Meanwhile, an envelope analysis is focused on as the main intelligent technique embedded on the node due to the envelope analysis being the most effective and general method to characterise impulsive and modulating signatures. Such signatures can commonly be found on faulty signals generated by key machinery components, such as bearings, gears, turbines, and valves. Through a preliminary optimisation in implementing envelope analysis based on fast Fourier transform (FFT), an envelope spectrum of 2048 points is successfully achieved on a processor with a memory usage of 32 kB. Experimental results show that the simulated bearing faults can be clearly identified from the calculated envelope spectrum. Meanwhile, the data throughput requirement is reduced by more than 95% in comparison with the raw data transmission. To optimise the performance of the vibration monitoring node, three main techniques have been developed and validated: 1) A new data processing scheme is developed by combining three subsequent processing techniques: down-sampling, data frame overlapping and cascading. On this basis, a frequency resolution of 0.61 Hz in the envelope spectrum is achieved on the same processor. 2) The optimal band-pass filter for envelope analysis is selected by a scheme, in which the complicated fast kurtogram is implemented on the host computer for selecting optimal band-pass filter and real-time envelope analysis on the wireless sensor for extracting bearing fault features. Moreover, a frequency band of 16 kHz is analysed, which allows features to be extracted in a wide frequency band, covering a wide category of industrial applications. 3) Two new analysis methods: short-time RMS and spectral correlation algorithms are proposed for bearing fault diagnosis. They can significantly reduce the CPU usage, being over two times less and consequently much lower power consumptio

ECG analysis and classification using CSVM, MSVM and SIMCA classifiers

Reliable ECG classification can potentially lead to better detection methods and increase accurate diagnosis of arrhythmia, thus improving quality of care. This thesis investigated the use of two novel classification algorithms: CSVM and SIMCA, and assessed their performance in classifying ECG beats. The project aimed to introduce a new way to interactively support patient care in and out of the hospital and develop new classification algorithms for arrhythmia detection and diagnosis. Wave (P-QRS-T) detection was performed using the WFDB Software Package and multiresolution wavelets. Fourier and PCs were selected as time-frequency features in the ECG signal; these provided the input to the classifiers in the form of DFT and PCA coefficients. ECG beat classification was performed using binary SVM. MSVM, CSVM, and SIMCA; these were subsequently used for simultaneously classifying either four or six types of cardiac conditions. Binary SVM classification with 100% accuracy was achieved when applied on feature-reduced ECG signals from well-established databases using PCA. The CSVM algorithm and MSVM were used to classify four ECG beat types: NORMAL, PVC, APC, and FUSION or PFUS; these were from the MIT-BIH arrhythmia database (precordial lead group and limb lead II). Different numbers of Fourier coefficients were considered in order to identify the optimal number of features to be presented to the classifier. SMO was used to compute hyper-plane parameters and threshold values for both MSVM and CSVM during the classifier training phase. The best classification accuracy was achieved using fifty Fourier coefficients. With the new CSVM classifier framework, accuracies of 99%, 100%, 98%, and 99% were obtained using datasets from one, two, three, and four precordial leads, respectively. In addition, using CSVM it was possible to successfully classify four types of ECG beat signals extracted from limb lead simultaneously with 97% accuracy, a significant improvement on the 83% accuracy achieved using the MSVM classification model. In addition, further analysis of the following four beat types was made: NORMAL, PVC, SVPB, and FUSION. These signals were obtained from the European ST-T Database. Accuracies between 86% and 94% were obtained for MSVM and CSVM classification, respectively, using 100 Fourier coefficients for reconstructing individual ECG beats. Further analysis presented an effective ECG arrhythmia classification scheme consisting of PCA as a feature reduction method and a SIMCA classifier to differentiate between either four or six different types of arrhythmia. In separate studies, six and four types of beats (including NORMAL, PVC, APC, RBBB, LBBB, and FUSION beats) with time domain features were extracted from the MIT-BIH arrhythmia database and the St Petersburg INCART 12-lead Arrhythmia Database (incartdb) respectively. Between 10 and 30 PCs, coefficients were selected for reconstructing individual ECG beats in the feature selection phase. The average classification accuracy of the proposed scheme was 98.61% and 97.78 % using the limb lead and precordial lead datasets, respectively. In addition, using MSVM and SIMCA classifiers with four ECG beat types achieved an average classification accuracy of 76.83% and 98.33% respectively. The effectiveness of the proposed algorithms was finally confirmed by successfully classifying both the six beat and four beat types of signal respectively with a high accuracy ratio

Advanced Interfaces for HMI in Hand Gesture Recognition

The present thesis investigates techniques and technologies for high quality Human Machine Interfaces (HMI) in biomedical applications. Starting from a literature review and considering market SoA in this field, the thesis explores advanced sensor interfaces, wearable computing and machine learning techniques for embedded resource-constrained systems. The research starts from the design and implementation of a real-time control system for a multifinger hand prosthesis based on pattern recognition algorithms. This system is capable to control an artificial hand using a natural gesture interface, considering the challenges related to the trade-off between responsiveness, accuracy and light computation. Furthermore, the thesis addresses the challenges related to the design of a scalable and versatile system for gesture recognition with the integration of a novel sensor interface for wearable medical and consumer application

Wavelet Theory

The wavelet is a powerful mathematical tool that plays an important role in science and technology. This book looks at some of the most creative and popular applications of wavelets including biomedical signal processing, image processing, communication signal processing, Internet of Things (IoT), acoustical signal processing, financial market data analysis, energy and power management, and COVID-19 pandemic measurements and calculations. The editor’s personal interest is the application of wavelet transform to identify time domain changes on signals and corresponding frequency components and in improving power amplifier behavior

On the Recognition of Emotion from Physiological Data

This work encompasses several objectives, but is primarily concerned with an experiment where 33 participants were shown 32 slides in order to create ‗weakly induced emotions‘. Recordings of the participants‘ physiological state were taken as well as a self report of their emotional state. We then used an assortment of classifiers to predict emotional state from the recorded physiological signals, a process known as Physiological Pattern Recognition (PPR). We investigated techniques for recording, processing and extracting features from six different physiological signals: Electrocardiogram (ECG), Blood Volume Pulse (BVP), Galvanic Skin Response (GSR), Electromyography (EMG), for the corrugator muscle, skin temperature for the finger and respiratory rate. Improvements to the state of PPR emotion detection were made by allowing for 9 different weakly induced emotional states to be detected at nearly 65% accuracy. This is an improvement in the number of states readily detectable. The work presents many investigations into numerical feature extraction from physiological signals and has a chapter dedicated to collating and trialing facial electromyography techniques. There is also a hardware device we created to collect participant self reported emotional states which showed several improvements to experimental procedure

dsPIC-based signal processing techniques and an IT-enabled distributed system for intelligent process monitoring and management

dsPIC Technology employs a powerful 16-bit architecture into single-chip devices that seamlessly integrate the diverse attributes of a microcontroller with the computation and throughput capabilities of a digital signal processor in a single core. The key element of this dissertation is to explore how dsPIC has influenced the applicability of research in e-Monitoring systems. At the same time dsPIC has offered the opportunity to develop methodologies which were previously not even considered. The dsPIC devices are used, in this research, for front end data acquisition, signal processing and communication tools within a proposed monitoring architecture. In this work, novel digital signal processing (DSP) techniques are developed for the monitoring of an example application, namely the challenging one of tool breakage in milling operations. The monitoring regime is implemented on the dsPIC and its capabilities for real-time frequency analysis using overlap FFT and Multiband IIR Filters with dynamic coefficient selection techniques is explored. The developed systems are tested for various cutting conditions using existing machine tool signals and tool breakage is detected reliably in real-time. In attempting to enhance the accuracy of tool monitoring it is evident that the depth of cut (DOC) is an important parameter and achieving its on-line monitoring provides valuable information for condition monitoring. A systematic approach is adopted for the analysis and selection of ultrasonic sensors for distance measurement. A DOC monitoring system is developed using the dsPIC as the data acquisition and processing core. To achieve reliable results, various DSP algorithms are developed, implemented and verified for their effectiveness. The system integration stage combines the above elements for robust and reliable decision making and provides communication of the generated information to support management function using the internet and GSM connectivity. This integration enables an enhanced process management system which is capable of identifying all significant events, for offline analysis and subsequent diagnosis in addition to the real time diagnostic mode