17,093 research outputs found
Factorial graphical lasso for dynamic networks
Dynamic networks models describe a growing number of important scientific
processes, from cell biology and epidemiology to sociology and finance. There
are many aspects of dynamical networks that require statistical considerations.
In this paper we focus on determining network structure. Estimating dynamic
networks is a difficult task since the number of components involved in the
system is very large. As a result, the number of parameters to be estimated is
bigger than the number of observations. However, a characteristic of many
networks is that they are sparse. For example, the molecular structure of genes
make interactions with other components a highly-structured and therefore
sparse process.
Penalized Gaussian graphical models have been used to estimate sparse
networks. However, the literature has focussed on static networks, which lack
specific temporal constraints. We propose a structured Gaussian dynamical
graphical model, where structures can consist of specific time dynamics, known
presence or absence of links and block equality constraints on the parameters.
Thus, the number of parameters to be estimated is reduced and accuracy of the
estimates, including the identification of the network, can be tuned up. Here,
we show that the constrained optimization problem can be solved by taking
advantage of an efficient solver, logdetPPA, developed in convex optimization.
Moreover, model selection methods for checking the sensitivity of the inferred
networks are described. Finally, synthetic and real data illustrate the
proposed methodologies.Comment: 30 pp, 5 figure
Evolutionary Multiobjective Optimization Driven by Generative Adversarial Networks (GANs)
Recently, increasing works have proposed to drive evolutionary algorithms
using machine learning models. Usually, the performance of such model based
evolutionary algorithms is highly dependent on the training qualities of the
adopted models. Since it usually requires a certain amount of data (i.e. the
candidate solutions generated by the algorithms) for model training, the
performance deteriorates rapidly with the increase of the problem scales, due
to the curse of dimensionality. To address this issue, we propose a
multi-objective evolutionary algorithm driven by the generative adversarial
networks (GANs). At each generation of the proposed algorithm, the parent
solutions are first classified into real and fake samples to train the GANs;
then the offspring solutions are sampled by the trained GANs. Thanks to the
powerful generative ability of the GANs, our proposed algorithm is capable of
generating promising offspring solutions in high-dimensional decision space
with limited training data. The proposed algorithm is tested on 10 benchmark
problems with up to 200 decision variables. Experimental results on these test
problems demonstrate the effectiveness of the proposed algorithm
Natural evolution strategies and variational Monte Carlo
A notion of quantum natural evolution strategies is introduced, which
provides a geometric synthesis of a number of known quantum/classical
algorithms for performing classical black-box optimization. Recent work of
Gomes et al. [2019] on heuristic combinatorial optimization using neural
quantum states is pedagogically reviewed in this context, emphasizing the
connection with natural evolution strategies. The algorithmic framework is
illustrated for approximate combinatorial optimization problems, and a
systematic strategy is found for improving the approximation ratios. In
particular it is found that natural evolution strategies can achieve
approximation ratios competitive with widely used heuristic algorithms for
Max-Cut, at the expense of increased computation time
Beyond Biomass: Valuing Genetic Diversity in Natural Resource Management
Strategies for increasing production of goods from working and natural systems have raised concerns that the diversity of species on which these services depend may be eroding. This loss of natural capital threatens to homogenize global food supplies and compromise the stability of human welfare. We assess the trade off between artificial augmentation of biomass and degradation of biodiversity underlying a populations' ability to adapt to shocks. Our application involves the augmentation of wild stocks of salmon. Practices in this system have generated warnings that genetic erosion may lead to a loss of the “portfolio effect” and the value of this loss is not accounted for in decision making. We construct an integrated bioeconomic model of salmon biomass and genetic diversity. Our results show how practices that homogenize natural systems can still generate positive returns. However, the substitution of more physical capital and labor for natural capital must be maintained for gains to persist, weakens the capacity for adaptation should this investment cease, and can cause substantial loss of population wildness. We apply an emerging optimization method—approximate dynamic programming—to solve the model without simplifying restrictions imposed previously
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