Knowledge-aware Deep Framework for Collaborative Skin Lesion Segmentation and Melanoma Recognition

Deep learning techniques have shown their superior performance in dermatologist clinical inspection. Nevertheless, melanoma diagnosis is still a challenging task due to the difficulty of incorporating the useful dermatologist clinical knowledge into the learning process. In this paper, we propose a novel knowledge-aware deep framework that incorporates some clinical knowledge into collaborative learning of two important melanoma diagnosis tasks, i.e., skin lesion segmentation and melanoma recognition. Specifically, to exploit the knowledge of morphological expressions of the lesion region and also the periphery region for melanoma identification, a lesion-based pooling and shape extraction (LPSE) scheme is designed, which transfers the structure information obtained from skin lesion segmentation into melanoma recognition. Meanwhile, to pass the skin lesion diagnosis knowledge from melanoma recognition to skin lesion segmentation, an effective diagnosis guided feature fusion (DGFF) strategy is designed. Moreover, we propose a recursive mutual learning mechanism that further promotes the inter-task cooperation, and thus iteratively improves the joint learning capability of the model for both skin lesion segmentation and melanoma recognition. Experimental results on two publicly available skin lesion datasets show the effectiveness of the proposed method for melanoma analysis.Comment: Pattern Recognitio

Melanoma segmentation using deep learning with test-time augmentations and conditional random fields

In a computer-aided diagnostic (CAD) system for skin lesion segmentation, variations in shape and size of the skin lesion makes the segmentation task more challenging. Lesion segmentation is an initial step in CAD schemes as it leads to low error rates in quantification of the structure, boundary, and scale of the skin lesion. Subjective clinical assessment of the skin lesion segmentation results provided by current state-of-the-art deep learning segmentation techniques does not offer the required results as per the inter-observer agreement of expert dermatologists. This study proposes a novel deep learning-based, fully automated approach to skin lesion segmentation, including sophisticated pre and postprocessing approaches. We use three deep learning models, including UNet, deep residual U-Net (ResUNet), and improved ResUNet (ResUNet++). The preprocessing phase combines morphological filters with an inpainting algorithm to eliminate unnecessary hair structures from the dermoscopic images. Finally, we used test time augmentation (TTA) and conditional random field (CRF) in the postprocessing stage to improve segmentation accuracy. The proposed method was trained and evaluated on ISIC-2016 and ISIC-2017 skin lesion datasets. It achieved an average Jaccard Index of 85.96% and 80.05% for ISIC-2016 and ISIC-2017 datasets, when trained individually. When trained on combined dataset (ISIC-2016 and ISIC-2017), the proposed method achieved an average Jaccard Index of 80.73% and 90.02% on ISIC-2017 and ISIC-2016 testing datasets. The proposed methodological framework can be used to design a fully automated computer-aided skin lesion diagnostic system due to its high scalability and robustness

SkinNet: A Deep Learning Framework for Skin Lesion Segmentation

There has been a steady increase in the incidence of skin cancer worldwide, with a high rate of mortality. Early detection and segmentation of skin lesions are crucial for timely diagnosis and treatment, necessary to improve the survival rate of patients. However, skin lesion segmentation is a challenging task due to the low contrast of lesions and their high similarity in terms of appearance, to healthy tissue. This underlines the need for an accurate and automatic approach for skin lesion segmentation. To tackle this issue, we propose a convolutional neural network (CNN) called SkinNet. The proposed CNN is a modified version of U-Net. We compared the performance of our approach with other state-of-the-art techniques, using the ISBI 2017 challenge dataset. Our approach outperformed the others in terms of the Dice coefficient, Jaccard index and sensitivity, evaluated on the held-out challenge test data set, across 5-fold cross validation experiments. SkinNet achieved an average value of 85.10, 76.67 and 93.0%, for the DC, JI, and SE, respectively.Comment: 2 pages, submitted to NSS/MIC 201

Segmentation and classification of skin lesions using hybrid deep learning method in the Internet of Medical Things

Introduction Particularly within the Internet of Medical Things (IoMT) context, skin lesion analysis is critical for precise diagnosis. To improve the accuracy and efficiency of skin lesion analysis, CAD systems play a crucial role. To segment and classify skin lesions from dermoscopy images, this study focuses on using hybrid deep learning techniques. Method This research uses a hybrid deep learning model that combines two cutting-edge approaches: Mask Region-based Convolutional Neural Network (MRCNN) for semantic segmentation and ResNet50 for lesion detection. To pinpoint the precise location of a skin lesion, the MRCNN is used for border delineation. We amass a huge, annotated collection of dermoscopy images for thorough model training. The hybrid deep learning model to capture subtle representations of the images is trained from start to finish using this dataset. Results The experimental results using dermoscopy images show that the suggested hybrid method outperforms the current state-of-the-art methods. The model's capacity to segment lesions into distinct groups is demonstrated by a segmentation accuracy measurement of 95.49 percent. In addition, the classification of skin lesions shows great accuracy and dependability, which is a notable advancement over traditional methods. The model is put through its paces on the ISIC 2020 Challenge dataset, scoring a perfect 96.75% accuracy. Compared to current best practices in IoMT, segmentation and classification models perform exceptionally well. Conclusion In conclusion, this paper's hybrid deep learning strategy is highly effective in skin lesion segmentation and classification. The results show that the model has the potential to improve diagnostic accuracy in the setting of IoMT, and it outperforms the current gold standards. The excellent results obtained on the ISIC 2020 Challenge dataset further confirm the viability and superiority of the suggested methodology for skin lesion analysis.© 2023 The Authors. Skin Research and Technology published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.fi=vertaisarvioitu|en=peerReviewed

Skin Lesion Analysis Towards Melanoma Detection Using Deep Learning Network

Skin lesion is a severe disease in world-wide extent. Early detection of melanoma in dermoscopy images significantly increases the survival rate. However, the accurate recognition of melanoma is extremely challenging due to the following reasons, e.g. low contrast between lesions and skin, visual similarity between melanoma and non-melanoma lesions, etc. Hence, reliable automatic detection of skin tumors is very useful to increase the accuracy and efficiency of pathologists. International Skin Imaging Collaboration (ISIC) is a challenge focusing on the automatic analysis of skin lesion. In this paper, we proposed two deep learning methods to address all the three tasks announced in ISIC 2017, i.e. lesion segmentation (task 1), lesion dermoscopic feature extraction (task 2) and lesion classification (task 3). A deep learning framework consisting of two fully-convolutional residual networks (FCRN) is proposed to simultaneously produce the segmentation result and the coarse classification result. A lesion index calculation unit (LICU) is developed to refine the coarse classification results by calculating the distance heat-map. A straight-forward CNN is proposed for the dermoscopic feature extraction task. To our best knowledges, we are not aware of any previous work proposed for this task. The proposed deep learning frameworks were evaluated on the ISIC 2017 testing set. Experimental results show the promising accuracies of our frameworks, i.e. 0.718 for task 1, 0.833 for task 2 and 0.823 for task 3 were achieved.Comment: ISIC201