MetaGL: Evaluation-Free Selection of Graph Learning Models via Meta-Learning

Given a graph learning task, such as link prediction, on a new graph, how can we select the best method as well as its hyperparameters (collectively called a model) without having to train or evaluate any model on the new graph? Model selection for graph learning has been largely ad hoc. A typical approach has been to apply popular methods to new datasets, but this is often suboptimal. On the other hand, systematically comparing models on the new graph quickly becomes too costly, or even impractical. In this work, we develop the first meta-learning approach for evaluation-free graph learning model selection, called MetaGL, which utilizes the prior performances of existing methods on various benchmark graph datasets to automatically select an effective model for the new graph, without any model training or evaluations. To quantify similarities across a wide variety of graphs, we introduce specialized meta-graph features that capture the structural characteristics of a graph. Then we design G-M network, which represents the relations among graphs and models, and develop a graph-based meta-learner operating on this G-M network, which estimates the relevance of each model to different graphs. Extensive experiments show that using MetaGL to select a model for the new graph greatly outperforms several existing meta-learning techniques tailored for graph learning model selection (up to 47% better), while being extremely fast at test time (~1 sec).Comment: ICLR 202

A Network-Based High-Level Data Classification Algorithm Using Betweenness Centrality

Data classification is a major machine learning paradigm, which has been widely applied to solve a large number of real-world problems. Traditional data classification techniques consider only physical features (e.g., distance, similarity, or distribution) of the input data. For this reason, those are called \textit{low-level} classification. On the other hand, the human (animal) brain performs both low and high orders of learning and it has a facility in identifying patterns according to the semantic meaning of the input data. Data classification that considers not only physical attributes but also the pattern formation is referred to as \textit{high-level} classification. Several high-level classification techniques have been developed, which make use of complex networks to characterize data patterns and have obtained promising results. In this paper, we propose a pure network-based high-level classification technique that uses the betweenness centrality measure. We test this model in nine different real datasets and compare it with other nine traditional and well-known classification models. The results show us a competent classification performance

Log file anomaly detection using knowledge graphs and graph neural networks

Log files contain valuable information for detecting abnormal behavior. To detect anomalies, researchers have proposed representing log files as knowledge graphs (KGs) and using KG completion (KGC) techniques to predict new facts. However, current research in this area is limited, and there is no end-to-end system that includes both KG generation and KGC for log-based anomaly detection. In this study, we present an end-to-end system that utilizes graph neural networks (GNNs) and KGC to detect anomalies in log files. The proposed system has two main components. The first component employs templates to generate a KG from logs that capture normal behavior. The second component applies KG embedding models enhanced with GNN layers to the generated KG and employs KGC to determine suspiciousness of new information through binary classification. We evaluated the proposed method using two public datasets with standard KGC metrics. The experimental results demonstrate its promising potential

Automating Geospatial RDF Dataset Integration and Enrichment

Over the last years, the Linked Open Data (LOD) has evolved from a mere 12 to more than 10,000 knowledge bases. These knowledge bases come from diverse domains including (but not limited to) publications, life sciences, social networking, government, media, linguistics. Moreover, the LOD cloud also contains a large number of crossdomain knowledge bases such as DBpedia and Yago2. These knowledge bases are commonly managed in a decentralized fashion and contain partly verlapping information. This architectural choice has led to knowledge pertaining to the same domain being published by independent entities in the LOD cloud. For example, information on drugs can be found in Diseasome as well as DBpedia and Drugbank. Furthermore, certain knowledge bases such as DBLP have been published by several bodies, which in turn has lead to duplicated content in the LOD . In addition, large amounts of geo-spatial information have been made available with the growth of heterogeneous Web of Data. The concurrent publication of knowledge bases containing related information promises to become a phenomenon of increasing importance with the growth of the number of independent data providers. Enabling the joint use of the knowledge bases published by these providers for tasks such as federated queries, cross-ontology question answering and data integration is most commonly tackled by creating links between the resources described within these knowledge bases. Within this thesis, we spur the transition from isolated knowledge bases to enriched Linked Data sets where information can be easily integrated and processed. To achieve this goal, we provide concepts, approaches and use cases that facilitate the integration and enrichment of information with other data types that are already present on the Linked Data Web with a focus on geo-spatial data. The first challenge that motivates our work is the lack of measures that use the geographic data for linking geo-spatial knowledge bases. This is partly due to the geo-spatial resources being described by the means of vector geometry. In particular, discrepancies in granularity and error measurements across knowledge bases render the selection of appropriate distance measures for geo-spatial resources difficult. We address this challenge by evaluating existing literature for point set measures that can be used to measure the similarity of vector geometries. Then, we present and evaluate the ten measures that we derived from the literature on samples of three real knowledge bases. The second challenge we address in this thesis is the lack of automatic Link Discovery (LD) approaches capable of dealing with geospatial knowledge bases with missing and erroneous data. To this end, we present Colibri, an unsupervised approach that allows discovering links between knowledge bases while improving the quality of the instance data in these knowledge bases. A Colibri iteration begins by generating links between knowledge bases. Then, the approach makes use of these links to detect resources with probably erroneous or missing information. This erroneous or missing information detected by the approach is finally corrected or added. The third challenge we address is the lack of scalable LD approaches for tackling big geo-spatial knowledge bases. Thus, we present Deterministic Particle-Swarm Optimization (DPSO), a novel load balancing technique for LD on parallel hardware based on particle-swarm optimization. We combine this approach with the Orchid algorithm for geo-spatial linking and evaluate it on real and artificial data sets. The lack of approaches for automatic updating of links of an evolving knowledge base is our fourth challenge. This challenge is addressed in this thesis by the Wombat algorithm. Wombat is a novel approach for the discovery of links between knowledge bases that relies exclusively on positive examples. Wombat is based on generalisation via an upward refinement operator to traverse the space of Link Specifications (LS). We study the theoretical characteristics of Wombat and evaluate it on different benchmark data sets. The last challenge addressed herein is the lack of automatic approaches for geo-spatial knowledge base enrichment. Thus, we propose Deer, a supervised learning approach based on a refinement operator for enriching Resource Description Framework (RDF) data sets. We show how we can use exemplary descriptions of enriched resources to generate accurate enrichment pipelines. We evaluate our approach against manually defined enrichment pipelines and show that our approach can learn accurate pipelines even when provided with a small number of training examples. Each of the proposed approaches is implemented and evaluated against state-of-the-art approaches on real and/or artificial data sets. Moreover, all approaches are peer-reviewed and published in a conference or a journal paper. Throughout this thesis, we detail the ideas, implementation and the evaluation of each of the approaches. Moreover, we discuss each approach and present lessons learned. Finally, we conclude this thesis by presenting a set of possible future extensions and use cases for each of the proposed approaches