Mathematical Foundations of Consciousness

We employ the Zermelo-Fraenkel Axioms that characterize sets as mathematical primitives. The Anti-foundation Axiom plays a significant role in our development, since among other of its features, its replacement for the Axiom of Foundation in the Zermelo-Fraenkel Axioms motivates Platonic interpretations. These interpretations also depend on such allied notions for sets as pictures, graphs, decorations, labelings and various mappings that we use. A syntax and semantics of operators acting on sets is developed. Such features enable construction of a theory of non-well-founded sets that we use to frame mathematical foundations of consciousness. To do this we introduce a supplementary axiomatic system that characterizes experience and consciousness as primitives. The new axioms proceed through characterization of so- called consciousness operators. The Russell operator plays a central role and is shown to be one example of a consciousness operator. Neural networks supply striking examples of non-well-founded graphs the decorations of which generate associated sets, each with a Platonic aspect. Employing our foundations, we show how the supervening of consciousness on its neural correlates in the brain enables the framing of a theory of consciousness by applying appropriate consciousness operators to the generated sets in question

Transformation-Based Bottom-Up Computation of the Well-Founded Model

We present a framework for expressing bottom-up algorithms to compute the well-founded model of non-disjunctive logic programs. Our method is based on the notion of conditional facts and elementary program transformations studied by Brass and Dix for disjunctive programs. However, even if we restrict their framework to nondisjunctive programs, their residual program can grow to exponential size, whereas for function-free programs our program remainder is always polynomial in the size of the extensional database (EDB). We show that particular orderings of our transformations (we call them strategies) correspond to well-known computational methods like the alternating fixpoint approach, the well-founded magic sets method and the magic alternating fixpoint procedure. However, due to the confluence of our calculi, we come up with computations of the well-founded model that are provably better than these methods. In contrast to other approaches, our transformation method treats magic set transformed programs correctly, i.e. it always computes a relevant part of the well-founded model of the original program.Comment: 43 pages, 3 figure

Classifying sequences by the optimized dissimilarity space embedding approach: a case study on the solubility analysis of the E. coli proteome

We evaluate a version of the recently-proposed classification system named Optimized Dissimilarity Space Embedding (ODSE) that operates in the input space of sequences of generic objects. The ODSE system has been originally presented as a classification system for patterns represented as labeled graphs. However, since ODSE is founded on the dissimilarity space representation of the input data, the classifier can be easily adapted to any input domain where it is possible to define a meaningful dissimilarity measure. Here we demonstrate the effectiveness of the ODSE classifier for sequences by considering an application dealing with the recognition of the solubility degree of the Escherichia coli proteome. Solubility, or analogously aggregation propensity, is an important property of protein molecules, which is intimately related to the mechanisms underlying the chemico-physical process of folding. Each protein of our dataset is initially associated with a solubility degree and it is represented as a sequence of symbols, denoting the 20 amino acid residues. The herein obtained computational results, which we stress that have been achieved with no context-dependent tuning of the ODSE system, confirm the validity and generality of the ODSE-based approach for structured data classification.Comment: 10 pages, 49 reference

The use of data-mining for the automatic formation of tactics

This paper discusses the usse of data-mining for the automatic formation of tactics. It was presented at the Workshop on Computer-Supported Mathematical Theory Development held at IJCAR in 2004. The aim of this project is to evaluate the applicability of data-mining techniques to the automatic formation of tactics from large corpuses of proofs. We data-mine information from large proof corpuses to find commonly occurring patterns. These patterns are then evolved into tactics using genetic programming techniques

Applications of Metric Coinduction

Metric coinduction is a form of coinduction that can be used to establish properties of objects constructed as a limit of finite approximations. One can prove a coinduction step showing that some property is preserved by one step of the approximation process, then automatically infer by the coinduction principle that the property holds of the limit object. This can often be used to avoid complicated analytic arguments involving limits and convergence, replacing them with simpler algebraic arguments. This paper examines the application of this principle in a variety of areas, including infinite streams, Markov chains, Markov decision processes, and non-well-founded sets. These results point to the usefulness of coinduction as a general proof technique

A unified framework for building ontological theories with application and testing in the field of clinical trials

The objective of this research programme is to contribute to the establishment of the emerging science of Formal Ontology in Information Systems via a collaborative project involving researchers from a range of disciplines including philosophy, logic, computer science, linguistics, and the medical sciences. The re­searchers will work together on the construction of a unified formal ontology, which means: a general framework for the construction of ontological theories in specific domains. The framework will be constructed using the axiomatic-deductive method of modern formal ontology. It will be tested via a series of applications relating to on-going work in Leipzig on medical taxonomies and data dictionaries in the context of clinical trials. This will lead to the production of a domain-specific ontology which is designed to serve as a basis for applications in the medical field