Bat Algorithm: Literature Review and Applications

Bat algorithm (BA) is a bio-inspired algorithm developed by Yang in 2010 and BA has been found to be very efficient. As a result, the literature has expanded significantly in the last 3 years. This paper provides a timely review of the bat algorithm and its new variants. A wide range of diverse applications and case studies are also reviewed and summarized briefly here. Further research topics are also discussed.Comment: 10 page

Reconstructing the Forest of Lineage Trees of Diverse Bacterial Communities Using Bio-inspired Image Analysis

Cell segmentation and tracking allow us to extract a plethora of cell attributes from bacterial time-lapse cell movies, thus promoting computational modeling and simulation of biological processes down to the single-cell level. However, to analyze successfully complex cell movies, imaging multiple interacting bacterial clones as they grow and merge to generate overcrowded bacterial communities with thousands of cells in the field of view, segmentation results should be near perfect to warrant good tracking results. We introduce here a fully automated closed-loop bio-inspired computational strategy that exploits prior knowledge about the expected structure of a colony's lineage tree to locate and correct segmentation errors in analyzed movie frames. We show that this correction strategy is effective, resulting in improved cell tracking and consequently trustworthy deep colony lineage trees. Our image analysis approach has the unique capability to keep tracking cells even after clonal subpopulations merge in the movie. This enables the reconstruction of the complete Forest of Lineage Trees (FLT) representation of evolving multi-clonal bacterial communities. Moreover, the percentage of valid cell trajectories extracted from the image analysis almost doubles after segmentation correction. This plethora of trustworthy data extracted from a complex cell movie analysis enables single-cell analytics as a tool for addressing compelling questions for human health, such as understanding the role of single-cell stochasticity in antibiotics resistance without losing site of the inter-cellular interactions and microenvironment effects that may shape it

Bio-Inspired Resource Allocation for Relay-Aided Device-to-Device Communications

The Device-to-Device (D2D) communication principle is a key enabler of direct localized communication between mobile nodes and is expected to propel a plethora of novel multimedia services. However, even though it offers a wide set of capabilities mainly due to the proximity and resource reuse gains, interference must be carefully controlled to maximize the achievable rate for coexisting cellular and D2D users. The scope of this work is to provide an interference-aware real-time resource allocation (RA) framework for relay-aided D2D communications that underlay cellular networks. The main objective is to maximize the overall network throughput by guaranteeing a minimum rate threshold for cellular and D2D links. To this direction, genetic algorithms (GAs) are proven to be powerful and versatile methodologies that account for not only enhanced performance but also reduced computational complexity in emerging wireless networks. Numerical investigations highlight the performance gains compared to baseline RA methods and especially in highly dense scenarios which will be the case in future 5G networks.Comment: 6 pages, 6 figure

LVDS Serial AER Link performance

Address-Event-Representation (AER) is a communication protocol for transferring asynchronous events between VLSI chips, originally developed for bio-inspired processing systems (for example, image processing). Such systems may consist of a complicated hierarchical structure with many chips that transmit data among them in real time, while performing some processing (for example, convolutions). The event information is transferred using a high speed digital parallel bus (typically 16 bits and 20ns-40ns per event). This paper presents a testing platform for AER systems that allows analysing a LVDS Serial AER link produced by a Spartan 3 FPGA, or by a commercial LVDS transceiver. The interface allows up to 0.728 Gbps (~40Mev/s, 16 bits/ev). The eye diagram ensures that the platform could support 1.2 Gbps.Commission of the European Communities IST-2001-34124 (CAVIAR)Comisión Interministerial de Ciencia y Tecnología TIC-2003-08164-C03-0

A LVDS Serial AER Link

Address-Event-Representation (AER) is a communication protocol for transferring asynchronous events between VLSI chips, originally developed for bio-inspired processing systems (for example, image processing). Such systems may consist of a complicated hierarchical structure with many chips that transmit data among them in real time, while performing some processing (for example, convolutions). The event information is transferred using a high speed digital parallel bus (typically 16 bits and 20ns-40ns per event). This paper presents a testing platform for AER systems that allows to analyse a LVDS Serial AER link. The interface allows up to 0.7 Gbps (~40Mev/s, 16 bits/ev). The eye diagram ensures that the platform could support 1.2 Gbps.Commission of the European Communities IST-2001-34124 (CAVIAR)Comisión Interministerial de Ciencia y Tecnología TIC-2003-08164-C03-0

An Extended CMOS ISFET Model Incorporating the Physical Design Geometry and the Effects on Performance and Offset Variation

This paper presents an extended model for the CMOS-based ion-sensitive field-effect transistor, incorporating design parameters associated with the physical geometry of the device. This can, for the first time, provide a good match between calculated and measured characteristics by taking into account the effects of nonidealities such as threshold voltage variation and sensor noise. The model is evaluated through a number of devices with varying design parameters (chemical sensing area and MOSFET dimensions) fabricated in a commercially available 0.35-µm CMOS technology. Threshold voltage, subthreshold slope, chemical sensitivity, drift, and noise were measured and compared with the simulated results. The first- and second-order effects are analyzed in detail, and it is shown that the sensors' performance was in agreement with the proposed model