GEDLIB: Une bibliothèque C++ pour le calcul de la distance d'édition sur graphes

International audienceThe graph edit distance (GED) is a flexible graph dissimilarity measure widely used within the structural pattern recognition field. In this paper, we present GEDLIB, a C++ library for exactly or approximately computing GED. Many existing algorithms for GED are already implemented in GEDLIB. Moreover, GEDLIB is designed to be easily extensible: for implementing new edit cost functions and GED algorithms, it suffices to implement abstract classes contained in the library. For implementing these extensions, the user has access to a wide range of utilities, such as deep neural networks, support vector machines, mixed integer linear programming solvers, a blackbox optimizer, and solvers for the linear sum assignment problem with and without error-correction

Un algorithme Hongrois pour l'appariement de graphes avec correction d'erreurs

International audienceBipartite graph matching algorithms become more and more popular to solve error-correcting graph matching problems and to approximate the graph edit distance of two graphs. However, the memory requirements and execution times of this method are respectively proportional to (n + m) 2 and (n + m) 3 where n and m are the order of the graphs. Subsequent developments reduced these complexities. However , these improvements are valid only under some constraints on the parameters of the graph edit distance. We propose in this paper a new formulation of the bipartite graph matching algorithm designed to solve efficiently the associated graph edit distance problem. The resulting algorithm requires O(nm) memory space and O(min(n, m) 2 max(n, m)) execution times.L'appariement de graphes biparti deviennent de plus en plus populaires pour résoudre des problèmes d'appariement de graphes avec correction d'erreurs et pour approximer la distance d'édition sur graphes. Cependant, les exigences en mémoire et temps de calcul de cette méthode sont respectivement proportionnels à (n + m)^2 et (n + m)^3 où n et m représentent la taille des deux graphes. Des développements ultérieurs ont réduit ces complexités. Cependant, ces améliorations ne sont valables que sous certaines contraintes sur les paramètres de la distance d'édition. Nous proposons dans cet article une nouvelle formulation de l'algorithme Hongrois conçu pour résoudre efficacement le problème de distance d'édition associé. L'algorithme résultat nécessite un espace mémoire O (nm) et des temps d'exécution O (min (n, m)^2 max (n, m))

Upper Bounding the Graph Edit Distance Based on Rings and Machine Learning

The graph edit distance (GED) is a flexible distance measure which is widely used for inexact graph matching. Since its exact computation is NP-hard, heuristics are used in practice. A popular approach is to obtain upper bounds for GED via transformations to the linear sum assignment problem with error-correction (LSAPE). Typically, local structures and distances between them are employed for carrying out this transformation, but recently also machine learning techniques have been used. In this paper, we formally define a unifying framework LSAPE-GED for transformations from GED to LSAPE. We also introduce rings, a new kind of local structures designed for graphs where most information resides in the topology rather than in the node labels. Furthermore, we propose two new ring based heuristics RING and RING-ML, which instantiate LSAPE-GED using the traditional and the machine learning based approach for transforming GED to LSAPE, respectively. Extensive experiments show that using rings for upper bounding GED significantly improves the state of the art on datasets where most information resides in the graphs' topologies. This closes the gap between fast but rather inaccurate LSAPE based heuristics and more accurate but significantly slower GED algorithms based on local search

Approximate Graph Edit Distance Guided by Bipartite Matching of Bags of Walks

International audienceThe definition of efficient similarity or dissimilarity measures between graphs is a key problem in structural pattern recognition. This problem is nicely addressed by the graph edit distance, which constitutes one of the most flexible graph dissimilarity measure in this field. Unfortunately, the computation of an exact graph edit distance is known to be exponential in the number of nodes. In the early beginning of this decade, an efficient heuristic based on a bipartite assignment algorithm has been proposed to find efficiently a suboptimal solution. This heuristic based on an optimal matching of nodes' neighborhood provides a good approximation of the exact edit distance for graphs with a large number of different labels and a high density. Unfortunately, this heuristic gworks poorly on unlabeled graphs or graphs with a poor diversity of neighborhoods. In this work we propose to extend this heuristic by considering a mapping of bags of walks centered on each node of both graphs