Euclidean Distance Matrices: Essential Theory, Algorithms and Applications

Euclidean distance matrices (EDM) are matrices of squared distances between points. The definition is deceivingly simple: thanks to their many useful properties they have found applications in psychometrics, crystallography, machine learning, wireless sensor networks, acoustics, and more. Despite the usefulness of EDMs, they seem to be insufficiently known in the signal processing community. Our goal is to rectify this mishap in a concise tutorial. We review the fundamental properties of EDMs, such as rank or (non)definiteness. We show how various EDM properties can be used to design algorithms for completing and denoising distance data. Along the way, we demonstrate applications to microphone position calibration, ultrasound tomography, room reconstruction from echoes and phase retrieval. By spelling out the essential algorithms, we hope to fast-track the readers in applying EDMs to their own problems. Matlab code for all the described algorithms, and to generate the figures in the paper, is available online. Finally, we suggest directions for further research.Comment: - 17 pages, 12 figures, to appear in IEEE Signal Processing Magazine - change of title in the last revisio

A Unified Algorithmic Framework for Block-Structured Optimization Involving Big Data: With applications in machine learning and signal processing

This article presents a powerful algorithmic framework for big data optimization, called the block successive upper-bound minimization (BSUM). The BSUM includes as special cases many well-known methods for analyzing massive data sets, such as the block coordinate descent (BCD) method, the convex-concave procedure (CCCP) method, the block coordinate proximal gradient (BCPG) method, the nonnegative matrix factorization (NMF) method, the expectation maximization (EM) method, etc. In this article, various features and properties of the BSUM are discussed from the viewpoint of design flexibility, computational efficiency, parallel/distributed implementation, and the required communication overhead. Illustrative examples from networking, signal processing, and machine learning are presented to demonstrate the practical performance of the BSUM framework

Divide-and-Conquer Method for Instanton Rate Theory

Ring-polymer instanton theory has been developed to simulate the quantum dynamics of molecular systems at low temperatures. Chemical reaction rates can be obtained by locating the dominant tunneling pathway and analyzing fluctuations around it. In the standard method, calculating the fluctuation terms involves the diagonalization of a large matrix, which can be unfeasible for large systems with a high number of ring-polymer beads. Here we present a method for computing the instanton fluctuations with a large reduction in computational scaling. This method is applied to three reactions described by fitted, analytic and on-the-fly ab initio potential-energy surfaces and is shown to be numerically stable for the calculation of thermal reaction rates even at very low temperature

IK-FA, a new heuristic inverse kinematics solver using firefly algorithm

In this paper, a heuristic method based on Firefly Algorithm is proposed for inverse kinematics problems in articulated robotics. The proposal is called, IK-FA. Solving inverse kinematics, IK, consists in finding a set of joint-positions allowing a specific point of the system to achieve a target position. In IK-FA, the Fireflies positions are assumed to be a possible solution for joints elementary motions. For a robotic system with a known forward kinematic model, IK-Fireflies, is used to generate iteratively a set of joint motions, then the forward kinematic model of the system is used to compute the relative Cartesian positions of a specific end-segment, and to compare it to the needed target position. This is a heuristic approach for solving inverse kinematics without computing the inverse model. IK-FA tends to minimize the distance to a target position, the fitness function could be established as the distance between the obtained forward positions and the desired one, it is subject to minimization. In this paper IK-FA is tested over a 3 links articulated planar system, the evaluation is based on statistical analysis of the convergence and the solution quality for 100 tests. The impact of key FA parameters is also investigated with a focus on the impact of the number of fireflies, the impact of the maximum iteration number and also the impact of (a, ß, ¿, d) parameters. For a given set of valuable parameters, the heuristic converges to a static fitness value within a fix maximum number of iterations. IK-FA has a fair convergence time, for the tested configuration, the average was about 2.3394 × 10-3 seconds with a position error fitness around 3.116 × 10-8 for 100 tests. The algorithm showed also evidence of robustness over the target position, since for all conducted tests with a random target position IK-FA achieved a solution with a position error lower or equal to 5.4722 × 10-9.Peer ReviewedPostprint (author's final draft

Application of the Genetic Algorithm at Initial Stages of Ships Design

The main tasks for which the genetic algorithm is currently applied in shipbuilding are shown. The possibility of applying the genetic algorithm for determining the optimal characteristics of ships at the initial stages of design is considered.The formulation of the problem of parametric optimization for the initial stages of design is given. The features of such a problem and possible approaches to its solution are considered. Using the example of the problem of parametric optimization of small waterplane area twin hull ships, it is shown that the traditional methods of non-linear programming are not very effective. It is shown that one of the possible options for increasing the efficiency of searching for the optimal solution is the application of genetic algorithms. The mathematical bases of GA are considered and the scheme for finding the optimal solution using this method is described. The examples of test functions show the effectiveness of the genetic algorithm in comparison with traditional optimization methods. The results of solving the problem of parametric optimization of high-speed SWATH passenger ships are presented

International Conference on Continuous Optimization (ICCOPT) 2019 Conference Book

The Sixth International Conference on Continuous Optimization took place on the campus of the Technical University of Berlin, August 3-8, 2019. The ICCOPT is a flagship conference of the Mathematical Optimization Society (MOS), organized every three years. ICCOPT 2019 was hosted by the Weierstrass Institute for Applied Analysis and Stochastics (WIAS) Berlin. It included a Summer School and a Conference with a series of plenary and semi-plenary talks, organized and contributed sessions, and poster sessions. This book comprises the full conference program. It contains, in particular, the scientific program in survey style as well as with all details, and information on the social program, the venue, special meetings, and more