101,586 research outputs found
MPICH-G2: A Grid-Enabled Implementation of the Message Passing Interface
Application development for distributed computing "Grids" can benefit from
tools that variously hide or enable application-level management of critical
aspects of the heterogeneous environment. As part of an investigation of these
issues, we have developed MPICH-G2, a Grid-enabled implementation of the
Message Passing Interface (MPI) that allows a user to run MPI programs across
multiple computers, at the same or different sites, using the same commands
that would be used on a parallel computer. This library extends the Argonne
MPICH implementation of MPI to use services provided by the Globus Toolkit for
authentication, authorization, resource allocation, executable staging, and
I/O, as well as for process creation, monitoring, and control. Various
performance-critical operations, including startup and collective operations,
are configured to exploit network topology information. The library also
exploits MPI constructs for performance management; for example, the MPI
communicator construct is used for application-level discovery of, and
adaptation to, both network topology and network quality-of-service mechanisms.
We describe the MPICH-G2 design and implementation, present performance
results, and review application experiences, including record-setting
distributed simulations.Comment: 20 pages, 8 figure
Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline.
Modern computational neuroscience employs diverse software tools and multidisciplinary expertise to analyze heterogeneous brain data. The classical problems of gathering meaningful data, fitting specific models, and discovering appropriate analysis and visualization tools give way to a new class of computational challenges--management of large and incongruous data, integration and interoperability of computational resources, and data provenance. We designed, implemented and validated a new paradigm for addressing these challenges in the neuroimaging field. Our solution is based on the LONI Pipeline environment [3], [4], a graphical workflow environment for constructing and executing complex data processing protocols. We developed study-design, database and visual language programming functionalities within the LONI Pipeline that enable the construction of complete, elaborate and robust graphical workflows for analyzing neuroimaging and other data. These workflows facilitate open sharing and communication of data and metadata, concrete processing protocols, result validation, and study replication among different investigators and research groups. The LONI Pipeline features include distributed grid-enabled infrastructure, virtualized execution environment, efficient integration, data provenance, validation and distribution of new computational tools, automated data format conversion, and an intuitive graphical user interface. We demonstrate the new LONI Pipeline features using large scale neuroimaging studies based on data from the International Consortium for Brain Mapping [5] and the Alzheimer's Disease Neuroimaging Initiative [6]. User guides, forums, instructions and downloads of the LONI Pipeline environment are available at http://pipeline.loni.ucla.edu
Unifying Distributed Processing and Open Hypertext through a Heterogeneous Communication Model
A successful distributed open hypermedia system can be characterised by a scaleable architecture which is inherently distributed. While the architects of distributed hypermedia systems have addressed the issues of providing and retrieving distributed resources, they have often neglected to design systems with the inherent capability to exploit the distributed processing of this information. The research presented in this paper describes the construction and use of an open hypermedia system concerned equally with both of these facets
TANGO: Transparent heterogeneous hardware Architecture deployment for eNergy Gain in Operation
The paper is concerned with the issue of how software systems actually use
Heterogeneous Parallel Architectures (HPAs), with the goal of optimizing power
consumption on these resources. It argues the need for novel methods and tools
to support software developers aiming to optimise power consumption resulting
from designing, developing, deploying and running software on HPAs, while
maintaining other quality aspects of software to adequate and agreed levels. To
do so, a reference architecture to support energy efficiency at application
construction, deployment, and operation is discussed, as well as its
implementation and evaluation plans.Comment: Part of the Program Transformation for Programmability in
Heterogeneous Architectures (PROHA) workshop, Barcelona, Spain, 12th March
2016, 7 pages, LaTeX, 3 PNG figure
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