Long-Lived Counters with Polylogarithmic Amortized Step Complexity

A shared-memory counter is a well-studied and widely-used concurrent object. It supports two operations: An Inc operation that increases its value by 1 and a Read operation that returns its current value. Jayanti, Tan and Toueg [Jayanti et al., 2000] proved a linear lower bound on the worst-case step complexity of obstruction-free implementations, from read and write operations, of a large class of shared objects that includes counters. The lower bound leaves open the question of finding counter implementations with sub-linear amortized step complexity. In this paper, we address this gap. We present the first wait-free n-process counter, implemented using only read and write operations, whose amortized operation step complexity is O(log^2 n) in all executions. This is the first non-blocking read/write counter algorithm that provides sub-linear amortized step complexity in executions of arbitrary length. Since a logarithmic lower bound on the amortized step complexity of obstruction-free counter implementations exists, our upper bound is optimal up to a logarithmic factor

Efficient chaining of seeds in ordered trees

We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent with respect to postfix order and ancestrality. This problem is a natural extension of a similar problem for sequences, and has applications in computational biology, such as mining a database of RNA secondary structures. For the chaining problem with a set of m constant size seeds, we describe an algorithm with complexity O(m2 log(m)) in time and O(m2) in space

A Multi-level Blocking Distinct Degree Factorization Algorithm

We give a new algorithm for performing the distinct-degree factorization of a polynomial P(x) over GF(2), using a multi-level blocking strategy. The coarsest level of blocking replaces GCD computations by multiplications, as suggested by Pollard (1975), von zur Gathen and Shoup (1992), and others. The novelty of our approach is that a finer level of blocking replaces multiplications by squarings, which speeds up the computation in GF(2)[x]/P(x) of certain interval polynomials when P(x) is sparse. As an application we give a fast algorithm to search for all irreducible trinomials x^r + x^s + 1 of degree r over GF(2), while producing a certificate that can be checked in less time than the full search. Naive algorithms cost O(r^2) per trinomial, thus O(r^3) to search over all trinomials of given degree r. Under a plausible assumption about the distribution of factors of trinomials, the new algorithm has complexity O(r^2 (log r)^{3/2}(log log r)^{1/2}) for the search over all trinomials of degree r. Our implementation achieves a speedup of greater than a factor of 560 over the naive algorithm in the case r = 24036583 (a Mersenne exponent). Using our program, we have found two new primitive trinomials of degree 24036583 over GF(2) (the previous record degree was 6972593)

Interactive certificate for the verification of Wiedemann's Krylov sequence: application to the certification of the determinant, the minimal and the characteristic polynomials of sparse matrices

Certificates to a linear algebra computation are additional data structures for each output, which can be used by a-possibly randomized- verification algorithm that proves the correctness of each output. Wiede-mann's algorithm projects the Krylov sequence obtained by repeatedly multiplying a vector by a matrix to obtain a linearly recurrent sequence. The minimal polynomial of this sequence divides the minimal polynomial of the matrix. For instance, if the $n\times n$ input matrix is sparse with n 1+o(1) non-zero entries, the computation of the sequence is quadratic in the dimension of the matrix while the computation of the minimal polynomial is n 1+o(1), once that projected Krylov sequence is obtained. In this paper we give algorithms that compute certificates for the Krylov sequence of sparse or structured $n\times n$ matrices over an abstract field, whose Monte Carlo verification complexity can be made essentially linear. As an application this gives certificates for the determinant, the minimal and characteristic polynomials of sparse or structured matrices at the same cost

Ternary Syndrome Decoding with Large Weight

The Syndrome Decoding problem is at the core of many code-based cryptosystems. In this paper, we study ternary Syndrome Decoding in large weight. This problem has been introduced in the Wave signature scheme but has never been thoroughly studied. We perform an algorithmic study of this problem which results in an update of the Wave parameters. On a more fundamental level, we show that ternary Syndrome Decoding with large weight is a really harder problem than the binary Syndrome Decoding problem, which could have several applications for the design of code-based cryptosystems

Verified Analysis of Functional Data Structures

In recent work the author has analyzed a number of classical functional search tree and priority queue implementations with the help of the theorem prover Isabelle/HOL. The functional correctness proofs of AVL trees, red-black trees, 2-3 trees, 2-3-4 trees, 1-2 brother trees, AA trees and splay trees could be automated. The amortized logarithmic complexity of skew heaps, splay trees, splay heaps and pairing heaps had to be proved manually