An O(T log T) reduction from RAM computations to satisfiability

AbstractA new method is given for obtaining a boolean expression whose satisfiability is equivalent to the existence of an accepting computation of some nondeterministic machine. Although starting from random access machines, this method gives an expression of the same O(T log T) length as the best reduction from general Turing machines

History-Register Automata

Programs with dynamic allocation are able to create and use an unbounded number of fresh resources, such as references, objects, files, etc. We propose History-Register Automata (HRA), a new automata-theoretic formalism for modelling such programs. HRAs extend the expressiveness of previous approaches and bring us to the limits of decidability for reachability checks. The distinctive feature of our machines is their use of unbounded memory sets (histories) where input symbols can be selectively stored and compared with symbols to follow. In addition, stored symbols can be consumed or deleted by reset. We show that the combination of consumption and reset capabilities renders the automata powerful enough to imitate counter machines, and yields closure under all regular operations apart from complementation. We moreover examine weaker notions of HRAs which strike different balances between expressiveness and effectiveness.Comment: LMCS (improved version of FoSSaCS

A Time Hierarchy Theorem for the LOCAL Model

The celebrated Time Hierarchy Theorem for Turing machines states, informally, that more problems can be solved given more time. The extent to which a time hierarchy-type theorem holds in the distributed LOCAL model has been open for many years. It is consistent with previous results that all natural problems in the LOCAL model can be classified according to a small constant number of complexities, such as $O(1),O(\log^* n), O(\log n), 2^{O(\sqrt{\log n})}$, etc. In this paper we establish the first time hierarchy theorem for the LOCAL model and prove that several gaps exist in the LOCAL time hierarchy. 1. We define an infinite set of simple coloring problems called Hierarchical $2\frac{1}{2}$-Coloring}. A correctly colored graph can be confirmed by simply checking the neighborhood of each vertex, so this problem fits into the class of locally checkable labeling (LCL) problems. However, the complexity of the $k$-level Hierarchical $2\frac{1}{2}$-Coloring problem is $\Theta(n^{1/k})$, for $k\in\mathbb{Z}^+$. The upper and lower bounds hold for both general graphs and trees, and for both randomized and deterministic algorithms. 2. Consider any LCL problem on bounded degree trees. We prove an automatic-speedup theorem that states that any randomized $n^{o(1)}$-time algorithm solving the LCL can be transformed into a deterministic $O(\log n)$-time algorithm. Together with a previous result, this establishes that on trees, there are no natural deterministic complexities in the ranges $\omega(\log^* n)$---$o(\log n)$ or $\omega(\log n)$---$n^{o(1)}$. 3. We expose a gap in the randomized time hierarchy on general graphs. Any randomized algorithm that solves an LCL problem in sublogarithmic time can be sped up to run in $O(T_{LLL})$ time, which is the complexity of the distributed Lovasz local lemma problem, currently known to be $\Omega(\log\log n)$ and $O(\log n)$

Complexity of Restricted and Unrestricted Models of Molecular Computation

In [9] and [2] a formal model for molecular computing was proposed, which makes focused use of affinity purification. The use of PCR was suggested to expand the range of feasible computations, resulting in a second model. In this note, we give a precise characterization of these two models in terms of recognized computational complexity classes, namely branching programs (BP) and nondeterministic branching programs (NBP) respectively. This allows us to give upper and lower bounds on the complexity of desired computations. Examples are given of computable and uncomputable problems, given limited time