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Replication and update of molecular biology databases in a grid environment

By J. Salzemann, N. Jacq, Gaël Le Mahec and Vincent BRETON

Abstract

PCSV, présenté par V. Breton, à paraître dans les proceedingsUpdate of molecular biology databases is a growing burden on the biomedical research community. As the grid allows to share and replicate data, we propose a service to automatically update the biology databases from a single changing reference using web services. In this paper we report the components, the architecture and the deployment of the update service on the french RUGBI grid infrastructure. RUGBI is a computing grid infrastructure based on existing middleware and technologies for the community of scientists in bioinformatics

Topics: Grid computing, databases replication and update on grid, biological databases, grid services, web services, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], [INFO.INFO-DC]Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC]
Publisher: HAL CCSD
Year: 2006
OAI identifier: oai:HAL:in2p3-00114312v1

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