Thiocyanate linkage isomerism in the isobutyl ester form of the ruthenium dye known as N3

Abstract

<div><p>Using a modification of a recently reported convenient synthesis of the isobutyl ester form of the bis(isothiocyanato) ruthenium dye (N3), we report the isolation and spectroscopic characterization of the minor isomer in which one NCS<sup>−</sup> is N-bound and the other is S-bound. The synthesis involves the reaction of Ru(<sup>i</sup>Bu<sub>2</sub>dcbpy)<sub>2</sub>Cl<sub>2</sub>, where <sup>i</sup>Bu<sub>2</sub>dcbpy is the diisobutyl ester of 4,4′-dicarboxy-2,2′-bipyridine, with a source of thiocyanate. The impact of the isocyanate salt, solvent, and temperature on the yield of the linkage isomers is presented. In addition to the two linkage isomers <b>1</b> and <b>2</b>, the partially substituted chloroisothiocyanato complex <b>3</b>, Ru(<sup>i</sup>Bu<sub>2</sub>dcbpy)<sub>2</sub>Cl(NCS), was also isolated. Selective removal of the chloride using silver triflate provided a path to [Ru(<sup>i</sup>Bu<sub>2</sub>dcbpy)<sub>2</sub>(pyridine)(NCS)]OTf, <b>4</b>, in high yield. The complexes were characterized by <sup>1</sup>H and <sup>13</sup>C NMR, IR, and electronic absorption spectroscopies and mass spectrometry. At 80 °C in DMSO-d<sub>6</sub>, the isomerization of <b>2</b> to <b>1</b> is complete and exhibits first-order kinetics with a rate constant of 0.00014 s<sup>−1</sup>. Room temperature hydrolysis of the isobutyl ester groups of <b>2</b> using [<sup>n</sup>Bu<sub>4</sub> N]OH in acetonitrile produced a mixture of the two linkage isomers.</p></div

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The Francis Crick Institute

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Last time updated on 12/02/2018

This paper was published in The Francis Crick Institute.

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