Feedback between drought and deforestation in the Amazon

Deforestation and drought are among the greatest environmental pressures on the Amazon rainforest, possibly destabilizing the forest-climate system. Deforestation in the Amazon reduces rainfall regionally, while this deforestation itself has been reported to be facilitated by droughts. Here we quantify the interactions between drought and deforestation spatially across the Amazon during the early 21st century. First, we relate observed fluctuations in deforestation rates to dry-season intensity; second, we determine the effect of conversion of forest to cropland on evapotranspiration; and third, we simulate the subsequent downwind reductions in rainfall due to decreased atmospheric water input. We find large variability in the response of deforestation to dry-season intensity, with a significant but small average increase in deforestation rates with a more intense dry season: With every mm of water deficit, deforestation tends to increase by 0.13% per year. Deforestation, in turn, has caused an estimated 4% of the recent observed drying, with the south-western part of the Amazon being most strongly affected. Combining both effects, we quantify a reinforcing drought-deforestation feedback that is currently small, but becomes gradually stronger with cumulative deforestation. Our results suggest that global climate change, not deforestation, is the main driver of recent drying in the Amazon. However, a feedback between drought and deforestation implies that increases in either of them will impede efforts to curb both.</p

Collateral damage? Small-scale fisheries in the global fight against IUU fishing

Concern over illegal, unreported and unregulated (IUU) fishing has led to a number of policy, trade and surveillance measures. While much attention has been given to the impact of IUU regulation on industrial fleets, recognition of the distinct impacts on small-scale fisheries is conspicuously lacking from the policy and research debate. In this paper, we outline three ways in which the application of IUU discourse and regulation undermines small-scale fisheries. First, the mainstream construction of “illegal,” “unreported” and “unregulated” fishing, and also the categorical use of “IUU” in an all-inclusive sense, disregards the diversity, legitimacy and sustainability of small-scale fisheries practices and their governing systems. Second, we explore how the recent trade-related measures to counter IUU fishing mask and reinforce existing inequalities between different sectors and countries, creating an unfair burden on small-scale fisheries and countries who depend on them. Third, as IUU fishing is increasingly approached as “organized crime,” there is a risk of inappropriately targeting small-scale fisheries, at times violently. Reflecting on these three trends, we propose three strategies by which a more sensitive and ultimately more equitable incorporation of small-scale fisheries can be supported in the global fight against IUU fishing.</p

Anchoring innovation methodologies to ‘go-to-scale’; a framework to guide agricultural research for development

Research for development (R4D) projects increasingly engage in multi-stakeholder innovation platforms (IPs) as an innovation methodology, but there is limited knowledge of how the IP methodology spreads from one context to another. That is, how experimentation with an IP approach in one context leads to it being succesfully replicated in other contexts. To inspire development actors to consider the fit of an innovation methodology for a context, following work on anchoring for scaling, we developed a framework for networking-, methodological, and institutional anchoring and applied it to a R4D IP in order to test the value of such an anchoring approach for understanding the scaling of innovation methodologies such as IP. We selected a R4D project with a Farmer Research Group-Innovation Platform in Ethiopia, whose technical output and methodological approach were greatly appreciated by the actors involved. Using the anchoring framework, the executed or non-executed tasks were identified. Besides, the embedding of the methodological experiment the potential up-scaling and out-scaling were systematically analyzed. The analysis yielded the strengths and weaknesses of the anchoring work done so far to scale the innovation methodology used, and provided concrete suggestions of how to proceed if an innovation project considers ‘going to scale’. We recommend R4D projects to valorize their work and pay more explicit attention to anchoring. With a flexible, multi-pronged anchoring approach and continuous scanning of the progress made in context, more R4D projects and their associated innovation methodologies can ‘go to scale’.</p

Sward lifting in compacted grassland : Contrasting effects on two different soils

Soil compaction can affect the productivity of permanent grassland. The effectiveness of methods to alleviate compaction depends on compaction level and soil type. We applied sward lifting in compacted grassland on a sandy loam and a heavy clay soil and measured effects on soil characteristics, grass roots, and grass productivity for a period of up to 32 months. Our results show that sward lifting improved soil structure in the heavily compacted sandy loam for at least 31 months. This led to an improvement in water drainage; sward-lifted plots dried up an estimated 10 days earlier than control plots in spring 2017. A likely earlier start of root growth resulted in a higher grass herbage yield (+12% to +22%) and nitrogen (N) uptake (+13% to +22%) in three first growth periods but in only relatively small gains over the entire experimental period (+4% and +8%, respectively). The higher herbage N uptake on sward-lifted plots over the experimental period (+76 kg N ha−1) was offset by a small N loss (−67 kg N ha−1) from the 0–30 cm soil layer. On the heavy clay, sward lifting also improved soil structure and rooting, but effects were smaller and shorter-lived, and herbage yield and N uptake tended to be lower over the entire experimental period (−6% and −5%, respectively). Here, the lower N uptake on sward-lifted plots over the experimental period (−43 kg N ha−1) was accompanied by a large soil N loss (−613 kg N ha−1). Based on all results, we conclude that sward lifting has limited attractiveness to alleviate compaction in water-retaining sandy soils when average penetration resistance in the topsoil is below 2.8 MPa. Sward lifting should be avoided on smectic clay soils altogether, as these soils have a high natural restoration capacity and sward lifting has more negative than positive effects.</p

Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild

Evolutionary adaptation is generally thought to occur through incremental mutational steps, but large mutational leaps can occur during its early stages. These are challenging to study in nature due to the difficulty of observing new genetic variants as they arise and spread, but characterizing their genomic dynamics is important for understanding factors favoring rapid adaptation. Here, we report genomic consequences of recent, adaptive song loss in a Hawaiian population of field crickets (Teleogryllus oceanicus). A discrete genetic variant, flatwing, appeared and spread approximately 15 years ago. Flatwing erases sound‐producing veins on male wings. These silent flatwing males are protected from a lethal, eavesdropping parasitoid fly. We sequenced, assembled and annotated the cricket genome, produced a linkage map, and identified a flatwing quantitative trait locus covering a large region of the X chromosome. Gene expression profiling showed that flatwing is associated with extensive genome‐wide effects on embryonic gene expression. We found that flatwing male crickets express feminized chemical pheromones. This male feminizing effect, on a different sexual signaling modality, is genetically associated with the flatwing genotype. Our findings suggest that the early stages of evolutionary adaptation to extreme pressures can be accompanied by greater genomic and phenotypic disruption than previously appreciated, and highlight how abrupt adaptation might involve suites of traits that arise through pleiotropy or genomic hitchhiking

Effects of Dutch livestock production on human health and the environment

Observed multiple adverse effects of livestock production have led to increasing calls for more sustainable livestock production. Quantitative analysis of adverse effects, which can guide public debate and policy development in this area, is limited and generally scattered across environmental, human health, and other science domains. The aim of this study was to bring together and, where possible, quantify and aggregate the effects of national-scale livestock production on 17 impact categories, ranging from impacts of particulate matter, emerging infectious diseases and odor annoyance to airborne nitrogen deposition on terrestrial nature areas and greenhouse gas emissions. Effects were estimated and scaled to total Dutch livestock production, with system boundaries including feed production, manure management and transport, but excluding slaughtering, retail and consumption. Effects were expressed using eight indicators that directly express Impact in the sense of the Drivers-Pressures-State-Impact-Response framework, while the remaining 14 express Pressures or States. Results show that livestock production may contribute both positively and negatively to human health with a human disease burden (expressed in disability-adjusted life years) of up to 4% for three different health effects: those related to particulate matter, zoonoses, and occupational accidents. The contribution to environmental impact ranges from 2% for consumptive water use in the Netherlands to 95% for phosphorus transfer to soils, and extends beyond Dutch borders. While some aggregation across impact categories was possible, notably for burden of disease estimates, further aggregation of disparate indicators would require normative value judgement. Despite difficulty of aggregation, the assessment shows that impacts receive a different contribution of different animal sectors. While some of our results are country-specific, the overall approach is generic and can be adapted and tuned according to specific contexts and information needs in other regions, to allow informed decision making across a broad range of impact categories.</p

MicroRNA-204-5p modulates mitochondrial biogenesis in C2C12 myotubes and associates with oxidative capacity in humans

Using an unbiased high-throughput microRNA (miRNA)-silencing screen combined with functional readouts for mitochondrial oxidative capacity in C2C12 myocytes, we previously identified 19 miRNAs as putative regulators of skeletal muscle mitochondrial metabolism. In the current study, we highlight miRNA-204-5p, identified from this screen, and further studied its role in the regulation of skeletal muscle mitochondrial function. Following silencing of miRNA-204-5p in C2C12 myotubes, gene and protein expression were assessed using quantitative polymerase chain reaction, microarray analysis, and western blot analysis, while morphological changes were studied by confocal microscopy. In addition, miRNA-204-5p expression was quantified in human skeletal muscle biopsies and associated with in vivo mitochondrial oxidative capacity. Transcript levels of PGC-1α (3.71-fold; p <.01), predicted as an miR-204-5p target, as well as mitochondrial DNA copy number (p <.05) and citrate synthase activity (p =.06) were increased upon miRNA-204-5p silencing in C2C12 myotubes. Silencing of miRNA-204-5p further resulted in morphological changes, induced gene expression of autophagy marker light chain 3 protein b (LC3B; q =.05), and reduced expression of the mitophagy marker FUNDC1 (q =.01). Confocal imaging revealed colocalization between the autophagosome marker LC3B and the mitochondrial marker OxPhos upon miRNA-204-5p silencing. Finally, miRNA-204-5p was differentially expressed in human subjects displaying large variation in oxidative capacity and its expression levels associated with in vivo measures of skeletal muscle mitochondrial function. In summary, silencing of miRNA-204-5p in C2C12 myotubes stimulated mitochondrial biogenesis, impacted on cellular morphology, and altered expression of markers related to autophagy and mitophagy. The association between miRNA-204-5p and in vivo mitochondrial function in human skeletal muscle further identifies miRNA-204-5p as an interesting modulator of skeletal muscle mitochondrial metabolism.</p