Collagenolytic proteases can hydrolyze both denatured and native collagen and are becoming
increasingly important commercially. The aim of this work was to select a new strain of Penicillium
sp. isolated from the soil of Caatinga for collagenase production. A factorial design 24 was
performed to determine the best conditions of enzyme production. Collagenolytic activity reported
on this work is about 2 times larger than existing data. According to the growth kinetics, after 126
hours of production, were obtained the highest values of collagenolytic activity and specific activity.
The highest values of collagenolytic activity and specific activity were obtained on a culture medium
containing 0.25% (w/v) gelatin, 200 rpm, pH 8.0 and 24 °C. Only two factors were statistically
significant: pH and temperature, both with negative effects. The experimental design made possible
to define fermentation culture conditions able to increase by 66% the value of the initial enzyme
activity.Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco 
(FACEPE) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Lima, Carolina Albuquerque

Porto, Ana Lúcia Figueiredo

Silvério, Sara C.

Teixeira, J. A.

Wanderley, Maria Carolina de Albuquerque

Universidade do Minho: RepositoriUM

Factorial design for collagenase production by Penicillium sp. selected from the Caatinga soil

Maria Carolina Albuquerque Wanderley

Carolina Lima

Sara Isabel da Cruz Silvério

José António Couto Teixeira

Ana Lúcia Figueiredo Porto

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FACTORIAL DESIGN FOR COLLAGENASE PRODUCTION BY Penicillium sp. SELECTED FROM THE CAATINGA SOIL

 XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     FACTORIAL DESIGN FOR COLLAGENASE PRODUCTION BY Penicillium sp. SELECTED FROM THE CAATINGA SOIL  Maria Carolina de Albuquerque Wanderley1, Carolina de Albuquerque Lima2, Sara Isabel da Cruz Silvério3, José António Couto Teixeira3, Ana Lúcia Figueiredo Porto4    1 Laboratory of Immunopathology Keizo Asami (LIKA), Federal University of Pernambuco, Av. Prof. Moraes Lins do Rego, s/n, 50670-901, Recife, PE, Brazil  2 Faculty of Science, Education and Technology of Garanhuns, University of Pernambuco-UPE, Av. Capitão Pedro Rodrigues, n° 105, Garanhuns, PE, Brazil  3 Centre of Biological Engineering, University of Minho, Campus Gualtar, 4710-057, Braga, Portugal 4 Department of Morphology and Animal Physiology, Federal Rural University of Pernambuco, Av. Dom Manoel de Medeiros, s/n, 52171-900, Recife, PE, Brazil  E-mail: mariacarolinawanderley@gmail.com  ABSTRACT  Collagenolytic proteases can hydrolyze both denatured and native collagen and are becoming increasingly important commercially. The aim of this work was to select a new strain of Penicillium sp. isolated from the soil of Caatinga for collagenase production. A factorial design 24 was performed to determine the best conditions of enzyme production. Collagenolytic activity reported on this work is about 2 times larger than existing data. According to the growth kinetics, after 126 hours of production, were obtained the highest values of collagenolytic activity and specific activity. The highest values of collagenolytic activity and specific activity were obtained on a culture medium containing 0.25% (w/v) gelatin, 200 rpm, pH 8.0 and 24 °C. Only two factors were statistically significant: pH and temperature, both with negative effects. The experimental design made possible to define fermentation culture conditions able to increase by 66% the value of the initial enzyme activity.  1. INTRODUCTION Collagen is the major fibrous element of skin, intestines, bones, tendons, cartilage, blood vessels and teeth found in all animals, corresponding to 30% of the total protein and 6% of the human body weight (Jain and Jain, 2010; Suphatharaprateep et al., 2011).   XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     Collagenolytic proteases can hydrolyze both native and denatured collagen and are becoming increasingly important commercially (Lima et al., 2009). The collagenase produced by microorganisms is preferable because of its biochemical diversity and susceptibility to genetic manipulation (Lima et al., 2011a; Rosso et al., 2012). Among the collagenolytic enzyme producing microorganisms, filamentous fungi have great advantages such as high productivity and low production costs and the resulting enzyme can be easily modified (Lima et al., 2011a). The enzyme production is extracellular which makes it particularly easy to recovery at the end of fermentation (Sandhya et. al., 2005). Studies report collagenase biosynthesis by fungi belonging to genera Aspergillus, Cladosporium, Penicillium and Alternaria (Yakovleva et al., 2006). The Penicillium species have a greater biotechnological potential compared to the other genera mentioned, both for the production of proteases and other enzymes. They can grow in different conditions as well as to use a wide variety of substrates (Ikram-ul-Haq and Mukhtar, 2007). The aim of this work was to select a new strain of the Penicillium genus, isolated from the soil of Caatinga (Pernambuco – Brazil), as a collagenase producer and to determine the best conditions for the production in an inexpensive culture medium containing only gelatin as substrate, evaluating the effect of temperature, pH, agitation and initial concentration of substrate. 2. MATERIAL AND METHODS 2.1. Microorganisms The strains of Penicillium sp. (SIS 20, SIS 21, SIS 23, SIS 24, SIS 26 and SIS 27) isolated from the soil of Serra Talhada and São José do Belmonte cities, present in Caatinga biome (Pernambuco – Brazil), were obtained from UCP - the Collection of the Catholic University of Pernambuco, UNICAP.  2.2. Culture media The culture media used for enzyme production was gelatin medium, consisting of: gelatin (0.5% w/v), MgSO4·7H2O (0.025 w/v), K2HPO4 (1.5 w/v), FeSO4·7H2O (0.015 w/v), CaCl2 (0.025 w/v) and mineral solution (1% w/v). This medium was sterilized in an autoclave at 121 °C for 15 min.  For the experiments aiming at defined the optimal composition of the culture medium, gelatin concentration values were (0.25% w/v), (0.50% w/v) and (0.75% w/v).  2.3. Screening of Penicillium Strains as Collagenase Producers Collagenase of Penicillium sp. strains was obtained from the culture supernatant. Strains were sub-cultured on malt extract agar plates, incubated at 30 °C for 72 h and a calibrated cellular suspension (corresponding to an average cell concentration of 106 cells/mL) was used to inoculated a 125 mL Erlenmeyer flask containing 25 mL of gelatin culture medium (0.50 w/v) supplemented with 1.0% (v/v) of a mineral solution, and grown for 72 h at 28 °C in an orbital incubator shaker with 150 rpm. After this time, cultures were filtered and the supernatants analyzed for collagenase production.  XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     2.4. Kinetics of Growth and Collagenase Production Inoculum spores were produced in agar plates containing a cell culture grown for 5 days at 28 °C, and then suspended in 3 mL of a 0.9% (w/v) NaCl and 0.01% (v/v) Tween 80 solution, previously sterilized at 121 °C for 20 min. After inoculation with a 150 µL spores suspension (106 spores/mL), fermentation was carried out for 8 days at 28 °C and 150 rpm in 1 L Erlenmeyer flasks containing 250 mL of the culture medium. At 6-hour intervals, samples were taken for determination of biomass, protein content and collagenolytic activity. Cotton caps were used to minimize water evaporation. The broth obtained at the end of fermentation (126 h) was vacuum filtered through 0.45 µm-pore diameter nitrocellulose membranes to remove the mycelium.  2.5. Screening of Significant Variables for Collagenase Production A 24 full design was carried out at all combinations of the levels given in Table 1. The center point was performed in quadruplicate, to provide an estimate of the variance of the pure experimental error responses. All statistical and graphical analyzes were performed with 95 % confidence using the Statistica 8.0 software (StatSoft Inc., Tulsa, OK, USA). Table 1. Factors and corresponding levels used in a 24 design to investigate the production of collagenase by Penicillium sp. isolated from caatinga  Level Factors Lowest (-1) Central (0) Highest (+1) pH 6.0 7.0 8.0 Gelatin concentration (%, p/v) 0.25 0.50 0.75 Temperature (°C) 24 28 32 Orbital agitation speed (rpm) 100 150 200  2.6. Analytical methods The Azo dye-impregnated collagen assay was carried out according to a modified version of the method developed by Chavira et al. (1984). Azocoll was washed and suspended in 0.05 M Tris-HCl buffer containing 1 mM CaCl2 up to a final concentration of 0.5% (w/v). Subsequently, 150 µL of cell-free filtrate and 150 µL of buffer were mixed with 270 µL of azocoll suspension in a 2.0-mL reaction tube, incubated at 37 °C in a water bath under agitation. After 18 h of incubation, the samples were chilled in ice for 5 min to stop the reaction and centrifuged at 10,000 × g and 4 °C for 20 min. The absorbance of the supernatant was measured at 520 nm by a UV-Vis spectrophotometer. One unit of enzyme activity (U) was defined as the amount of enzyme, per millilitre, that led, after 18 h of incubation, to an absorbance increase of 0.1 at 520 nm. Protein concentration was determined by the method of Bradford modified using "Coomassie Blue Bright" to detect minute amounts of protein in biological fluids. The calibration curve was made from stocks of bovine serum albumin (BSA) solutions. Biomass was determined by the dry weight method using pre-weighted nitrocellulose membranes with 0.45 µm-pore diameter, after drying at 80 °C for 24 h.  XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     3. RESULTS AND DISCUSSION The strain selected among the six species was Penicillium SIS 21, which had the best collagenolytic activity. The results for growth and collagenase production kinetics are shown in Figure 1. Enzyme synthesis is shown to begin began during the microbial growth phase, but the highest production occurs in the stationary phase. An increase in the enzyme activity is observed at 96 hours. -20 0 20 40 60 80 100 120 140 160 180 200 220050100150200250300350400  Collagenolytic activity (U)Collagenolytic activity (U)Time (h)Biomass (g/L)0.00.51.01.52.02.53.03.54.04.55.05.56.0 Biomass (g/L) Figure 1. Kinetics of growth and collagenase production by Penicillium SIS 21 isolated from caatinga in gelatin culture medium As the culture medium contained only gelatin and salts, it is likely that the fungus required an adaptive period.  This agrees with results reported by other authors that described the production of collagenase after the cell growth period (Lima et al., 2011b; Petrova et al., 2006; Suphatharaprateep et al., 2011). The highest collagenase activity was obtained after 126 hours, reaching 379.80 units. Based on these results, the incubation time for further optimization study was 126 hours.  Table 2 shows the conditions and results of the fermentations (after 126 hours) conducted according to the established experimental design. The highest values of collagenolytic activity (632.70 U/mL) and specific activity (3954.38 U/mg) were obtained with the run 9, conducted with 0.25% (w/v) gelatin, 200 rpm, pH 8.0 and 24 °C.  A full factorial model was designed to compare the activity data. This model included four main effects, six two-factor, four three-factor and one four-factor interactions. The statistically significant estimates of the effects (at the 95% confidence level) indicates that, on average, higher activities were obtained when factors 1 (pH) and 3 (temperature) were selected at their lowest levels. With respect to the effect of the factors on the biomass concentration, the substrate concentration was the only one that presented positive significant effect.  XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     Overall, the application of the factorial design allowed increasing the enzyme production by about 66%. The obtained values for collagenolytic activity values were substantially higher than those reported in the literature for Bacillus sp.: 43.5 U/mL (Jain and Jain, 2010), Candida albicans: 7.6 U/mL (Lima et al., 2009) and Penicillium aurantiogriseum: 164 U/mL (Lima et al., 2011a). Table 2. Conditions and results of fermentations conducted according to the 24 factorial design Run pH  So (%) T (°C) Agitation (rpm) X (g/L) TP (mg/mL) Ac (U) ac (U/mg) 1 6 0.25 24 100 0.48 0.15 531.55 3603.73 2 8 0.25 24 100 0.36 0.18 481.95 2744.20 3 6 0.75 24 100 0.80 0.25 447.65 1786.13 4 8 0.75 24 100 0.92 0.24 481.70 1996.68 5 6 0.25 32 100 0.53 0.13 560.20 4351.07 6 8 0.25 32 100 0.17 0.24 177.70 746.25 7 6 0.75 32 100 0.62 0.26 396.65 1544.14 8 8 0.75 32 100 0.72 0.19 349.50 1798.07 9 6 0.25 24 200 0.45 0.16 632.70 3954.38 10 8 0.25 24 200 0.30 0.16 471.20 2888.58 11 6 0.75 24 200 0.98 0.36 475.10 1319.72 12 8 0.75 24 200 0.40 0.36 424.15 1188.51 13 6 0.25 32 200 0.48 0.12 468.05 3920.84 14 8 0.25 32 200 0.51 0.15 424.10 2815.60 15 6 0.75 32 200 0.53 0.32 405.95 1271.08 16 8 0.75 32 200 0.38 0.20 338.65 1662.09 17 7 0.5 28 150 0.77 0.22 427.95 1923.37 18 7 0.5 28 150 0.75 0.23 424.85 1882.99 19 7 0.5 28 150 0.72 0.24 432.90 1842.13 20 7 0.5 28 150 0.74 0.23 428.80 1874.54  The values of the significant effects indicate that, on average, higher activities were obtained when factors 1 (pH) and 3 (temperature) were selected at their lowest levels. With respect to the effect of the factors on the biomass concentration, the substrate concentration was the only one that presented a positive significant effect.  4. CONCLUSIONS The fungus Penicillium SIS 21 isolated from soil of the caatinga proved to be a promising producer of the collagenase enzyme. The micro-organism was able to produce significantly higher values than reported in the literature using a simple and inexpensive substrate as culture medium. 5. ACKNOWLEDGMENTS  XX SIMPÓSIO NACIONAL DE BIOPROCESSOS XI SIMPÓSIO DE HIDRÓLISE ENZIMÁTICA DE BIOMASSA  01 a 04 de setembro de 2015 Fortaleza, Ceará, Brasil     This work was supported by Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco (FACEPE) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq). 6. REFERENCES Chavira, R.K., Burnett, T.J., Hageman, J.H., 1984. Assaying proteinases with azocoll. Anal Biochem. 136, 4446-4450. Ikram-Ul-Haq, H., Mukhtar, 2007. Biosynthesis of acid proteases by Penicillium griseoroseum IH-02 in solid-state fermentation. Pakist J Botan. 39, 2717-2724. Jain, R., Jain, P.C., 2010. Production and partial characterization of collagenase of Streptomyces exfoliates CFS 1068 using poultry feather. Indian J Exp Biol. 48, 174-178. Lima, C.A., Rodrigues, P.M.B., Porto, T.S., Viana, D.A., Lima Filho, J.S., Porto, A.L.F., Carneiro-da-Cunha, M.G., 2009. Production of a collagenase from Candida albicans URM3622. Biochem Eng J. 43, 315-320.  Lima, C.A., Lima Filho, J.L., Barros Neto, B., Converti, A., Carneiro-da-Cunha, M.G., Porto, A.L.F., 2011a. Production and characterization of a collagenolytic serine proteinase by Penicillium aurantiogriseum URM 4622: a factorial study. Biotechnol Bioproc Eng. 16, 549-560.  Lima, C.A., Marques, D.A.V., Neto, B.B., Lima Filho, J.L., Carneiro-da-Cunha, M.G., 2011b. Fermentation medium for collagenase production by Penicillium aurantiogriseum URM4622. Biotechnol Prog. 27, 1470-1477.  Petrova, D.H., Shishkov, S.A., Vlahov, A.A., 2006 Novel thermostable serine collagenase from Thermoactinomyces sp. 21E: purification and sob properties. J Basic Microbiol. 46, 275-285.  Rosso, B.A., Lima, C.A., Porto, T.S., Nascimento, C.O., Pessoa Júnior, A., Converti, A., Carneiro-da-Cunha, M.G., Porto, A.L.F., 2012 Partitioning and extraction of collagenase from Penicillium aurantiogriseum in poly(ethylene glycol)/phosphate aqueous two-phase system. Fl Ph Equil. 225, 20-25.  Sandhya, C., Sumantha, G., Szakacs, G, Pandey, A., 2005. Comparative evaluation of neutral protease production by Aspergillus oryzae in submerged and solid-state fermentation. Proc. Biochem. 40, 2689-2694. Suphatharaprateep, W., Cheirsilp, B, Jongjareonrak, A., 2011. Production and properties of two collagenases from bacteria and their application for collagen extraction. New Biotecnol. 28, 649-655. Yakovleva, M.B., Khoang, T.L., Nikitina, Z.K., 2006. Collagenolytic activity in several species of Deuteromycetes under various storage conditions. Appl Biochem Biotechnol. 42, 431-434. 

Factorial design for collagenase production by Penicillium sp. selected from the Caatinga soil

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