Actinomadura rubteroloni sp. nov. and Actinomadura macrotermitis sp. nov., isolated from the gut of the fungus growing-termite Macrotermes natalensis

Abstract

The taxonomic positions of two novel aerobic, Gram-positive actinobacteria, designated strains RB29T^{T} and RB68T, were determined using a polyphasic approach. Based on 16S rRNA gene sequence analysis, the closest phylogenetic neighbours of RB29T^{T} were identified as Actinomadura rayongensis DSM 102126T^{T} (99.2 % similarity) and Actinomadura atramentaria DSM 43919T^{T} (98.7 %), and for strain RB68T^{T} was Actinomadura hibisca DSM 44148T^{T} (98.3 %). Digital DNA–DNA hybridization (dDDH) between RB29T^{T} and its closest phylogenetic neighbours, A. rayongensis DSM 102126T^{T} and A. atramentaria DSM 43919T^{T}, resulted in similarity values of 53.2 % (50.6–55.9 %) and 26.4 % (24.1–28.9 %), respectively. Additionally, the average nucleotide identity (ANI) was 93.2 % (94.0 %) for A. rayongensis DSM 102126T^{T} and 82.3 % (78.9 %) for A. atramentaria DSM 43919T^{T}. dDDH analysis between strain RB68T^{T} and A. hibisca DSM 44148T^{T} gave a similarity value of 24.5 % (22.2–27.0 %). Both strains, RB29T^{T} and RB68T^{T}, revealed morphological characteristics and chemotaxonomic features typical for the genus Actinomadura, such as the presence of meso-diaminopimelic acid in the cell wall, galactose and glucose as major sugar components within whole-cell hydrolysates and the absence of mycolic acids. The major phospholipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and phosphatidylinositol mannoside. Predominant menaquinones were MK-9(H6_{6}) and MK-9(H8_{8}) for RB29T^{T} and MK-9(H4_{4}) and MK-9(H6_{6}) for RB68T. The main fatty acids were identified as 10-methyloctadecanoic acid (10-methyl C18:0_{18:0}), 14-methylpentadecanoic acid (iso-C16:0_{16:0}), hexadecanoic acid (C16:0_{16:0}) and cis-9-octadecanoic acid (C18:1_{18:1} ω9c). Here, we propose two novel species of the genus Actinomadura: Actinomadura rubteroloni sp. nov. with the type strain RB29T^{T} (=CCUG 72668T^{T}=NRRL B-65537T^{T}) and Actinomadura macrotermitis sp. nov. with the type strain RB68T^{T} (=CCUG 72669T^{T}=NRRL B-65538T^{T})

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