The analysis of the structure of musical pieces is a task that remains a
challenge for Artificial Intelligence, especially in the field of Deep
Learning. It requires prior identification of structural boundaries of the
music pieces. This structural boundary analysis has recently been studied with
unsupervised methods and \textit{end-to-end} techniques such as Convolutional
Neural Networks (CNN) using Mel-Scaled Log-magnitude Spectograms features
(MLS), Self-Similarity Matrices (SSM) or Self-Similarity Lag Matrices (SSLM) as
inputs and trained with human annotations. Several studies have been published
divided into unsupervised and \textit{end-to-end} methods in which
pre-processing is done in different ways, using different distance metrics and
audio characteristics, so a generalized pre-processing method to compute model
inputs is missing. The objective of this work is to establish a general method
of pre-processing these inputs by comparing the inputs calculated from
different pooling strategies, distance metrics and audio characteristics, also
taking into account the computing time to obtain them. We also establish the
most effective combination of inputs to be delivered to the CNN in order to
establish the most efficient way to extract the limits of the structure of the
music pieces. With an adequate combination of input matrices and pooling
strategies we obtain a measurement accuracy F1 of 0.411 that outperforms the
current one obtained under the same conditions