Correlation of ATP Binding Cassette Transporter A1 Gene Polymorphisms and Lower Extremity Atherosclerotic Disease

Abstract

目的:进行三磷酸腺苷结合盒转运体A1(ATP binding cassette transporter A1,ABCA1)基因单核苷酸多态性(single nucleotide polymorphisms,SNP)与下肢动脉粥样硬化(lower extremity atherosclerotic disease,LEAD)的关联分析。方法:收集福建省闽南地区630例体检者(314例LEAD者和316例正常者)的临床资料及外周血;采用Sequenom Mass Array系统对该人群的ABCA1基因9个SNP位点进行检测。结果:9个SNP位点中,rs2980083位点不符合Hardy-Weinberg平衡,分析中舍去;rs2066714与rs2066715,rs1800976与rs2246293,rs2246293与rs2980083,rs1800976与rs2980083等4组位点之间存在明显的连锁不平衡(D'〉0.9,r2〉1/3),对其构建的6种单倍型在两组的分布差异无统计学意义(P〉0.05);该8个SNP位点的基因型统计在病例对照分析中的分布频率未见显著差异(P〉0.05),基因logistic回归分析未显示有患病风险。结论:闽南汉族人群ABCA1基因rs10124755、rs2980083、rs1800976、rs4149341、rs2066714、rs2066715、rs2066716、rs2230808、rs2246293多态性可能与LEAD的遗传易感性无关。Objective: To analyze the correlation of single nucleotide polymorphisms (SNP) of ATP binding cassette transporter A1 gene (ABCA1) and lower extremity atherosclerotic disease (LEAD). Methods: The clinical data and peripheral blood were col- lected from 630 participants (314 LEAD cases and 316 normal controls) in Han population of Minnan. The 9 SNP genotypes in the ABCA1 gene were detected by Sequenom MassArray. Results: Among the 9 SNP genotypes, rs2980083 was rejected because it wash' t in accordance with Hardy-Weinberg equilibrium. Obvious linkage disequilibrium was found between rs2066714 and rs2066715, rs1800976 and rs2246293, rs2246293 and rs2980083, and rs1800976 and rs2980083 (D' 〉 0.9 ,r2 〉 1/3). There were no significant differenees ( P 〉 0.05 ) in 6 haplotypes of ABCA1 gene groups between the LEAD eases and the normal controls. No significant differ- ences ( P 〉 0.05 ) were found in frequency distribution between the LEAD cases and the normal controls in 8 SNP according to the re- sults of genotype statistics. There was no onset risk of LEAD according to the gene logistie regression analysis. Conelusion: The SNPs of rs10124755, rs2980083, rs1800976, rs4149341, rs2066714, rs2066715, rs2066716, rs2230808 and rs2246293 might not eorrelate with the susceptibility of LEAD in Han population of Minnan.2013年度南京军区医学科技创新课题(编号:MS098

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