Fact And Task Oriented System For Genome Assembly And Annotation

Abstract

We present a preliminary description and results of a system to help the curation of genome assembly and annotation. Standard tools are used for these tasks, and our methodology focuses on user guidance, data visualization and integration, and data browsing aspects. © Springer-Verlag Berlin Heidzelberg 2005.3594238241http://www2.iq.usp.br/bioquimica/(2004) Extensible Markup Language (XML) 1.0 (Third Edition), , http://www.w3.org/TR/2004/REC-xml-20040204Phrap, G.P., Phragment Assembly Program, , http://www.phrap.orghttp://www.lbi.ic.unicamp.brhttp://www.lbm.fcav.unesp.br/Setubal, J., Werneck, R., A program for building contig scaffolds in double-barreled shotgun genome sequencing (2001) Technical Report, IC-01-05. , Institute of Computing, Unicam