GERP scores and neutral model

Allaby, Robin G.; Arriaza, Bernardo; de Oliveira Freitas, Fabio; Gilbert, M. Thomas P.; Gregorio de Souza, Jonas; Grimaldo, Claudia; Kistler, Logan; Loiselle, Hope; Maezumi, S. Yoshi; Malaquias Costa, Flaviane; Morrison, Ryan R.; Prous, Andre P.; Przelomska, Natalia A. S.; Ramos-Madrigal, Jazmín; Ribeiro, Eduardo Rivail; Smith, Oliver; Wales, Nathan

GERP scores and neutral model

Authors: Robin G. Allaby
Bernardo Arriaza
Fabio de Oliveira Freitas
M. Thomas P. Gilbert
Jonas Gregorio de Souza
Claudia Grimaldo
Logan Kistler
Hope Loiselle
S. Yoshi Maezumi
Flaviane Malaquias Costa
Ryan R. Morrison
Andre P. Prous
Natalia A. S. Przelomska
Jazmín Ramos-Madrigal
Eduardo Rivail Ribeiro
Oliver Smith
Nathan Wales
Publication date: 12 December 2018
Publisher
Doi

Abstract

- GERP; mutation load analysis. - chr10.4degen.tre; newick-format neutral model tree generated from fourfold-degenerate sites of plant genomes aligned to chromosome 10 of maize. - Zea_mays.allChr.rates.gz; gerpcol output (expected substitutions and RS scores) used for analysis across the maize genome

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