Investigating fibroblast activation in response to extracellular cues using synthetic hydrogels

Abstract

Kloxin, April M.Fibrosis is a common and frequently life-threatening condition characterized by a buildup of stiff scar-like tissue that affects a variety of organs throughout the body and impacts millions of people every year. Fibroblast activation is a key event in fibrosis progression and is the subject of widespread study in vivo and in vitro. In healthy tissues, fibroblasts are responsible for tissue maintenance through protein secretion and matrix remodeling. In fibrotic tissues, fibroblasts are persistently activated, meaning they respond to changes in the microenvironment including the extracellular matrix (ECM) through overactive protein secretion and adoption of a contractile phenotype, disrupting matrix architecture, and causing stiff scar-like tissue to form. Fibrosis is understood to be the result of a feedback loop in which fibroblasts activate and create a fibrotic environment, and signals from that environment, like increased tissue stiffness, cause fibroblasts to persist in an activated state. If it were possible to disrupt this maladaptive feedback loop, it may be possible to halt the progression of fibrosis or even reverse its effects. ☐ Toward this goal, a variety of in vitro cell culture models have been developed to study cell-matrix interactions that contribute to fibroblast activation. These models are formed from a wide range of materials, use different methods of promoting fibroblast adhesion and promoting integrin binding, and culture fibroblasts in different cell culture geometries. Given this diversity, approaches are needed for comparison of different integrin-binding motifs and culture geometries for further insights into the drivers of fibroblast activation and improved designs of materials systems for studying and regulating these processes. In this thesis, I first review different types of hydrogel in vitro cell culture models that have been essential for understanding fibroblast activation. I then present new strategies for probing fibroblast response to different integrin binding motifs (whole proteins and integrin binding peptides) and different cell culture geometries (2D, 2.5D, and 3D geometries). I also present work investigating the use of a new boronic acid-based dynamic covalent material to enable fibroblast co-culture with other cell types. Throughout this work, pulmonary fibroblasts are used as a model fibroblast cell type and are of particular relevance for insights into lung fibrosis. The overall goals of this work are to understand how cell matrix interactions affect fibroblast activation and how the design of in vitro cell culture models affects fibroblast phenotype to enable comparisons of results among different models. ☐ First, for comparing fibroblast activation in response to different integrin binding motifs, I developed a technique for conjugating whole proteins to step growth hydrogel surfaces. This method enabled a side-by-side comparison of two protein peptide pairs commonly used in hydrogel in vitro models and relevant to fibroblast activation: collagen I and GFOGER, and fibronectin and PHSRN RGDS. Interestingly, significant differences were observed between collagen I and GFOGER, where the peptide promoted increased fibroblast activation and the formation of clusters reminiscent of activated foci observed in fibrotic tissue. ☐ Next, towards bridging the gap between traditional 2D culture and multidimensional in vivo microenvironments, I developed a technique for culturing fibroblasts in a layered hydrogel geometry referred to as 2.5D cell culture. This geometry mimics aspects of two common cell culture geometries, cells on top of hydrogels (2D culture) and cells encapsulated within hydrogels (3D culture), by allowing cells to initially spread without the requirement of matrix degradation while also reducing asymmetric cell polarization. Cell activation (alpha smooth muscle actin (αSMA) positive cells) was high and similar between the 2D and 2.5D geometry but less in the 3D geometry. Further, gene expression levels of CDH11, ITGB1, and Serpine 1, genes associated with cell-cell and cell-matrix interactions, were similar in 2D and 2.5D but lower in 3D culture. Interestingly, differences were observed in YAP nuclear localization between fibroblasts cultured in 2D and 2.5D cell culture. These results highlight the important role hydrogel geometry plays in directing fibroblast activation and mechanotransduction. ☐ Given the complicated interplay between matrix modulus, cell confinement, and cell polarization in multidimensional cell culture, new materials that allow for dynamic cell-matrix and cell-cell interactions would be useful and complement more traditional materials for 3D cell culture (e.g. cell-degradable, covalently-crosslinked hydrogels). To achieve this, I established approaches for using boronic acid-based hydrogels formed using dynamic covalent chemistry for 3D culture of fibroblasts and other cells of interest in the lung microenvironment, such as disseminated tumor cells. Good cell viability was observed in these materials over time, and the self-healing nature of these hydrogels was utilized for the construction of more complex geometries for dynamic co-culture of fibroblasts and breast cancer cells. ☐ Collectively, this work provides context for the interpretation of fibroblast behavior in common in vitro cell culture models by demonstrating the effects of integrin binding motifs and cell culture geometry on fibroblast activation. These studies lay the groundwork for future investigations into the mechanisms by which extracellular cues regulate fibroblast behavior, towards a better understanding fibroblast activation in vivo. Additionally, dynamic-covalent materials, such as the boronic acid-based hydrogels established here, could be useful for investigating the role of network structure on fibroblast behavior in 3D cell culture.University of Delaware, Department of Chemical and Biomolecular EngineeringPh.D

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