Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey-1

Abstract

<p><b>Copyright information:</b></p><p>Taken from "Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey"</p><p>http://www.biomedcentral.com/1471-2164/8/132</p><p>BMC Genomics 2007;8():132-132.</p><p>Published online 24 May 2007</p><p>PMCID:PMC1894642.</p><p></p>nces of soybean DNA, and estimation of copy number. Copy number was estimated according to the number of sequence survey reads aligning to each 1 kb window of the BACs. The alignment represents the superposition of identical or closely related sequences on the BAC sequence, in order to visualize the individual reads showing regions present in many copies per genome. The BAC sequences were: A) The euchromatic BAC described by Clough .(20); B) the euchromatic BAC GM_WBb0098N11; C) the BAC GM_WBb0078A23 from a heterochromatic regio

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