Improving protein function prediction methods with integrated literature data-1

Abstract

Ted correctly (TP). Abbreviations: GOMF – GO SLIM Molecular Function; GOBP – GO SLIM Biological Process; PPI ONLY – only edges from experiments measuring protein-protein interactions, such as yeast two-hybrid and affinity precipitation; GENETIC ONLY – only edges from genetic assays, such as synthetic lethality studies; PPI+GENETIC – edges from both PPI and from genetic assays, such as synthetic lethality studies; PPI+COLIT – edges from both PPI and edges between proteins found by literature co-occurrence, where Best and Worst correspond to the best and worst combinations of threshold setting and co-occurrence measure, respectively (. Figure 5).<p><b>Copyright information:</b></p><p>Taken from "Improving protein function prediction methods with integrated literature data"</p><p>http://www.biomedcentral.com/1471-2105/9/198</p><p>BMC Bioinformatics 2008;9():198-198.</p><p>Published online 15 Apr 2008</p><p>PMCID:PMC2375131.</p><p></p

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