Unfolding Action of Alcohols
on a Highly Negatively Charged State of Cytochrome <i>c</i>
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Abstract
It is well-known that hydrophobic effect play a major
role in alcohol–protein interactions leading to structure unfolding.
Studies with extremely alkaline cytochrome <i>c</i> (U<sub>B</sub> state, pH 13) in the presence of the first four alkyl alcohols
suggests that the hydrophobic effect persistently overrides even though
the protein carries a net charge of −17 under these conditions.
Equilibrium unfolding of the U<sub>B</sub> state is accompanied by
an unusual expansion of the chain involving an intermediate, I<sub>alc</sub>, from which water is preferentially excluded, the extent
of water exclusion being greater with the hydrocarbon content of the
alcohol. The mobility and environmental averaging of side chains in
the I<sub>alc</sub> state are generally constrained relative to those
in the U<sub>B</sub> state. A few nuclear magnetic resonance-detected
tertiary interactions are also found in the I<sub>alc</sub> state.
The fact that the I<sub>alc</sub> state populates at low concentrations
of methanol and ethanol and the fact that the extent of chain expansion
in this state approaches that of the U<sub>B</sub> state indicate
a definite influence of electrostatic repulsion severed by the low
dielectric of the water/alcohol mixture. Interestingly, the U<sub>B</sub> ⇌ I<sub>alc</sub> segment of the U<sub>B</sub> ⇌
I<sub>alc</sub> ⇌ U equilibrium, where U is the unfolded state,
accounts for roughly 85% of the total number of water molecules preferentially
excluded in unfolding. Stopped-flow refolding results report on a
submillisecond hydrophobic collapse during which almost the entire
buried surface area associated with the U<sub>B</sub> state is recovered,
suggesting the overwhelming
influence of hydrophobic interaction over electrostatic repulsions