Additional file 3: of Finding RNA structure in the unstructured RBPome

Abstract

Figure S3 There is no improvement in binding prediction from amino acid sequence by utilizing RNA structure with random structure probabilities. A) When we add RNA structural features to the sequence k-mer space of AffinityRegression, but assign structure probabilities randomly, we do no predict binding any better than using sequence features alone. B) When we add RNA structural features to the sequence k-mer space of AffinityRegression, but assign structure probabilities randomly, we do not predict the top-bound probes as compared to unbound probes any better than using sequence features alone. (PNG 68 kb

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