Dataset 1 contains the called genotypes for 60 plains zebras, 3 Grevy's zebras, 3 mountain zebras and one Quagga zebra. A total of 98,512 SNPs were called. The data is based on the RADseq technology. We used a missingness filter of 0.2 and excluded monomorphic sites.<div><br></div><div>We also include a list of SNPs inferred from pcadapt, which are putatively under selection.<br><div><br></div></div
