Hierarchical clustering of expression patterns for all 30,387 genes present on 1-plex Nimblegen <i>Arabidopsis thaliana</i> array.

Abstract

<p>Standardized transcript abundances (mean = 0, standard deviation = 1) for three biological replicates of nine treatments (Col-0 untreated, Col-0 + flg22, Col-0 + 3AB, Col-0 + 3MB, Col-0 + flg22 + 3AB, Col-0 + flg22 + 3MB, Col-0 + elf18, <i>parg1-2</i> untreated, and <i>parg1-2</i> + elf18) were used to determine Euclidean distances between treatments and genes, represented by the left and top dendrograms, respectively. f = 1μM flg22, e = 1μM elf18, A = 2.5mM 3-aminobenzmide (3AB), M = 2.5mM 3-methoxybenzamide (3MB), C = Col-0 (wild-type), p = <i>parg1-2</i>.</p