Discussion on "Sparse graphs using exchangeable random measures" by F. Caron
and E. B. Fox. In this discussion we contribute to the analysis of the GGP
model as compared to the Erdos-Renyi (ER) and the preferential attachment (AB)
models, using different measures such as number of connected components, global
clustering coefficient, assortativity coefficient and share of nodes in the
core.Comment: 2 pages, 1 figur

Brown, André EX

Ch'ng, Quee-Lim

Currie, Michael

Grundy, Laura J

Hokanson, Jim

Javer, Avelino

Kerr, Rex

Lee, Chee Wai

Li, Chris

Li, Kezhi

Schafer, William R

Yemini, Eviatar

English

arXiv

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=oV9qWe_Ebiw
strain : N2
timestamp : 2012-04-03T12:17:04+01:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : clockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : no waiting
who : Laura Grundy
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 no wait on food_2012_04_03__12_17_04___5___1
total time (s) : 7191.83
frames per second : 30.03
video micrometers per pixel : 4.2924
number of segmented skeletons : 20851

ZENODO

N2 Schafer Lab N2 (Bristol, UK) | 2012-04-03T12:17:04+01:00

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=lebtvA86mGU
strain : N2
timestamp : 2015-07-14T16:16:09+01:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : clockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : 30m wait
who : Laura Grundy
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 on food L_2015_07_14__16_16_09___5___4
total time (s) : 898.967
frames per second : 30.03
video micrometers per pixel : 4.60284
number of segmented skeletons : 2593

N2 Schafer Lab N2 (Bristol, UK) | 2015-07-14T16:16:09+01:00

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=7-ujZqJ6-nc
strain : N2
timestamp : 2009-07-10T16:53:28+01:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : anticlockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : 30m wait
who : Laura Grundy
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 on food R_2009_07_10__16_53_28__11
total time (s) : 299.964
frames per second : 25.8398
video micrometers per pixel : 9.4601
number of segmented skeletons : 665

N2 Schafer Lab N2 (Bristol, UK) | 2009-07-10T16:53:28+01:00

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=l9t21tkwXF4
strain : N2
timestamp : 2010-03-19T08:55:25+00:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : anticlockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : 30m wait
who : Laura Grundy
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 on food R_2010_03_19__08_55_25___7___1
total time (s) : 898.564
frames per second : 25.2525
video micrometers per pixel : 4.31067
number of segmented skeletons : 1927

N2 Schafer Lab N2 (Bristol, UK) | 2010-03-19T08:55:25+00:00

<blockquote>
This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org
</blockquote>

<ul>
<li>preview link : https://www.youtube.com/watch?v=Sl0pPutCIiM</li>
<li>strain : N2</li>
<li>timestamp : 2010-05-20T12:14:08+01:00</li>
<li>gene : -N/A-</li>
<li>chromosome : -N/A-</li>
<li>allele : -N/A-</li>
<li>strain_description : Schafer Lab N2 (Bristol, UK)</li>
<li>sex : hermaphrodite</li>
<li>stage : adult</li>
<li>ventral_side : clockwise</li>
<li>media : NGM agar low peptone</li>
<li>arena : <ul>
 <li>style : petri</li>
 <li>size : 35</li>
 <li>orientation : away</li>
 </ul>
</li>
<li>food : OP50</li>
<li>habituation : 30m wait</li>
<li>who : Laura Grundy</li>
<li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li>
<li>lab : <ul>
 <li>name : William R Schafer</li>
 <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li>
 </ul>
</li>
<li>software : <ul>
 <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li>
 <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li>
 <li>featureID : @OMG</li>
 </ul>
</li>
<li>base_name : N2 on food L_2010_05_20__12_14_08___2___4</li>
<li>total time (s) : 898.128</li>
<li>frames per second : 25.2525</li>
<li>video micrometers per pixel : 4.1716</li>
<li>number of segmented skeletons : 19368</li>
</ul

Javer, Avelino (5398151)

Currie, Michael (5398160)

Hokanson, Jim (5398172)

Lee, Chee Wai (5398145)

Li, Kezhi (5398157)

Yemini, Eviatar (5398169)

Grundy, Laura J (5398148)

Li, Chris (5398175)

Ch'ng, Quee-Lim (5398154)

Schafer, William R (5398166)

Kerr, Rex (5398163)

Brown, André EX (5398142)

FigShare

N2 Schafer Lab N2 (Bristol, UK) | 2010-05-20T12:14:08+01:00

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=Sl0pPutCIiM
strain : N2
timestamp : 2010-05-20T12:14:08+01:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : clockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : 30m wait
who : Laura Grundy
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 on food L_2010_05_20__12_14_08___2___4
total time (s) : 898.128
frames per second : 25.2525
video micrometers per pixel : 4.1716
number of segmented skeletons : 1936

This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org



preview link : https://www.youtube.com/watch?v=bQ0FSqPgX_M
strain : N2
timestamp : 2011-05-26T13:11:12+01:00
gene : -N/A-
chromosome : -N/A-
allele : -N/A-
strain_description : Schafer Lab N2 (Bristol, UK)
sex : hermaphrodite
stage : adult
ventral_side : clockwise
media : NGM agar low peptone
arena :   
  style : petri
  size : 35
  orientation : away
  

food : OP50
habituation : 30m wait
who : Monika Leubner
protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.
lab :   
  name : William R Schafer
  location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK
  

software :   
  name : tierpsy (https://github.com/ver228/tierpsy-tracker)
  version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219
  featureID : @OMG
  

base_name : N2 8 on food L_2011_05_26__13_11_12___8___3
total time (s) : 899.0
frames per second : 30.03
video micrometers per pixel : 4.52754
number of segmented skeletons : 2699

N2 Schafer Lab N2 (Bristol, UK) | 2011-05-26T13:11:12+01:00

<blockquote>
This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org
</blockquote>

<ul>
<li>preview link : https://www.youtube.com/watch?v=uyjDf2Qd7CM</li>
<li>strain : N2</li>
<li>timestamp : 2010-08-06T10:57:17+01:00</li>
<li>gene : -N/A-</li>
<li>chromosome : -N/A-</li>
<li>allele : -N/A-</li>
<li>strain_description : Schafer Lab N2 (Bristol, UK)</li>
<li>sex : hermaphrodite</li>
<li>stage : adult</li>
<li>ventral_side : anticlockwise</li>
<li>media : NGM agar low peptone</li>
<li>arena : <ul>
 <li>style : petri</li>
 <li>size : 35</li>
 <li>orientation : away</li>
 </ul>
</li>
<li>food : OP50</li>
<li>habituation : 30m wait</li>
<li>who : Laura Grundy</li>
<li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li>
<li>lab : <ul>
 <li>name : William R Schafer</li>
 <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li>
 </ul>
</li>
<li>software : <ul>
 <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li>
 <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li>
 <li>featureID : @OMG</li>
 </ul>
</li>
<li>base_name : M2 on food R_2010_08_06__10_57_17___7___1</li>
<li>total time (s) : 899.033</li>
<li>frames per second : 30.03</li>
<li>video micrometers per pixel : 4.14723</li>
<li>number of segmented skeletons : 25780</li>
</ul

N2 Schafer Lab N2 (Bristol, UK) | 2010-08-06T10:57:17+01:00

<blockquote>
This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org
</blockquote>

<ul>
<li>preview link : https://www.youtube.com/watch?v=lebtvA86mGU</li>
<li>strain : N2</li>
<li>timestamp : 2015-07-14T16:16:09+01:00</li>
<li>gene : -N/A-</li>
<li>chromosome : -N/A-</li>
<li>allele : -N/A-</li>
<li>strain_description : Schafer Lab N2 (Bristol, UK)</li>
<li>sex : hermaphrodite</li>
<li>stage : adult</li>
<li>ventral_side : clockwise</li>
<li>media : NGM agar low peptone</li>
<li>arena : <ul>
 <li>style : petri</li>
 <li>size : 35</li>
 <li>orientation : away</li>
 </ul>
</li>
<li>food : OP50</li>
<li>habituation : 30m wait</li>
<li>who : Laura Grundy</li>
<li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li>
<li>lab : <ul>
 <li>name : William R Schafer</li>
 <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li>
 </ul>
</li>
<li>software : <ul>
 <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li>
 <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li>
 <li>featureID : @OMG</li>
 </ul>
</li>
<li>base_name : N2 on food L_2015_07_14__16_16_09___5___4</li>
<li>total time (s) : 898.967</li>
<li>frames per second : 30.03</li>
<li>video micrometers per pixel : 4.60284</li>
<li>number of segmented skeletons : 25938</li>
</ul

Discussion on "Sparse graphs using exchangeable random measures" by F. Caron and E. B. Fox

Abstract

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