The health/disease duality has developed alongside human history either as a struggle for survival or as a challenge of the human being to effectively get to know himself. To speak about pests and diseases of plants may not be as exciting as when speaking of human beings; however, entomology and phytopathology hold methodological similarities to conventional medicine, which, thus, allow for correlations among them. After all, plant protection and human medical science are based under common epistemological principles of modern scientific thought. Hence, the goal of this essay is to disclose certain disagreements of the disciplines of phytopathology and entomology with agroecological based science; yet, giving way to a discussion according to ecological principles. This is a theoretical essay, based on bibliographical research and on the direct experience of the authors with family farmers in the South of Brazil during the last 20 years