Deep convolutional neural networks (CNNs) have shown excellent performance in
object recognition tasks and dense classification problems such as semantic
segmentation. However, training deep neural networks on large and sparse
datasets is still challenging and can require large amounts of computation and
memory. In this work, we address the task of performing semantic segmentation
on large data sets, such as three-dimensional medical images. We propose an
adaptive sampling scheme that uses a-posterior error maps, generated throughout
training, to focus sampling on difficult regions, resulting in improved
learning. Our contribution is threefold: 1) We give a detailed description of
the proposed sampling algorithm to speed up and improve learning performance on
large images. We propose a deep dual path CNN that captures information at fine
and coarse scales, resulting in a network with a large field of view and high
resolution outputs. We show that our method is able to attain new
state-of-the-art results on the VISCERAL Anatomy benchmark