Structural analysis and insertion study reveal the ideal sites for surface displaying foreign peptides on a betanodavirus-like particle

Abstract

Additional file 3: The averaged density distribution of the 3D reconstructions. The mass densities of the RBS are spherically averaged and plotted as a function of the particle radius. Below a radius of 115 Å is the density of enclosed RNA fragments (The RNA fragments do not belong to the virus genome, they are arbitrarily enclosed bacterial RNA). The density distribution between 115–150 Å and 150–190 Å are the capsid and the protrusion respectively. In the capsid shell, each subunit arranged in a “jerry-roll” structure results in that the capsid shell looks like two layers (two density peaks)